RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 NLRC4Q9NPP4 1024 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 PLCB1Q9NQ66 1216 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 NLRP12P59046 1061 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 CCNA1P78396 465 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 CFAP221Q4G0U5 840 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 NXNQ6DKJ4 435 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 TRIM56Q9BRZ2 755 aaKnown RBP12.34□□□□□ -0.43
PTCH1-205ENST00000418258 RAB20Q9NX57 234 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 IFNB1P01574 187 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 SAT1P21673 171 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 HADHQ16836 314 aaKnown RBP12.34□□□□□ -0.43
PTCH1-205ENST00000418258 MCTP2Q6DN12 878 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 KIAA1841Q6NSI8 718 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 CCDC84Q86UT8 332 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-205ENST00000418258 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 CACNA2D3Q8IZS8 1091 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTCH1-205ENST00000418258 PARD3BQ8TEW8 1205 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 FEZ2Q9UHY8 353 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-205ENST00000418258 ANAPC5Q9UJX4 755 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 GBP1P32455 592 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 BTDP43251 543 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 CLRN2A0PK11 232 aa12.33□□□□□ -0.43
PTCH1-205ENST00000418258 ZBTB7BO15156 539 aaPredicted RBP12.33□□□□□ -0.43
PTCH1-205ENST00000418258 GTF2A1P52655 376 aaPredicted RBP12.33□□□□□ -0.43
PTCH1-205ENST00000418258 PDZD4Q76G19 769 aaPredicted RBP12.33□□□□□ -0.43
PTCH1-205ENST00000418258 IPO11Q9UI26 975 aaKnown RBP12.33□□□□□ -0.43
PTCH1-205ENST00000418258 ZKSCAN5Q9Y2L8 839 aa12.33□□□□□ -0.43
PTCH1-205ENST00000418258 PDE6CP51160 858 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 AFAP1L1Q8TED9 768 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 AMFRQ9UKV5 643 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 RXRBP28702 533 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 KCTD2Q14681 263 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 ZBTB38Q8NAP3 1195 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-205ENST00000418258 GOLGA5Q8TBA6 731 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 ATP10AO60312 1499 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 ZNF496Q96IT1 587 aaPredicted RBP12.33□□□□□ -0.44
PTCH1-205ENST00000418258 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
PTCH1-205ENST00000418258 PPME1Q9Y570 386 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 MAGEA1P43355 309 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 TMTC4Q5T4D3 741 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 SPICE1Q8N0Z3 855 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 MGARPQ8TDB4 240 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 IFIH1Q9BYX4 1025 aaKnown RBP12.33□□□□□ -0.44
PTCH1-205ENST00000418258 VCXQ9H320 206 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 BICRAQ9NZM4 1560 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 H0YCG3 227 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 LONRF2Q1L5Z9 754 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 KAZNQ674X7 775 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 B4GALNT4Q76KP1 1039 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 CARD14Q9BXL6 1004 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 NUB1Q9Y5A7 615 aa12.33□□□□□ -0.44
PTCH1-205ENST00000418258 STK25O00506 426 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 KRT40Q6A162 431 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 U2AF1L4Q8WU68 220 aaKnown RBP12.32□□□□□ -0.44
PTCH1-205ENST00000418258 KDM2BQ8NHM5 1336 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 KLRF2D3W0D1 207 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 NRBP2Q9NSY0 501 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 GCC2Q8IWJ2 1684 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 PNMA6EA0A0J9YXQ4 647 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 PHBP35232 272 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 PLA2G4DQ86XP0 818 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 BLIDQ8IZY5 108 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 CSRNP1Q96S65 589 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 AOX1Q06278 1338 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 CASQ2O14958 399 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-205ENST00000418258 IL13P35225 146 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
PTCH1-205ENST00000418258 PRPSAP1Q14558 356 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 PNMA1Q8ND90 353 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 RAB17Q9H0T7 212 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 PARP2Q9UGN5 583 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 TRPC5Q9UL62 973 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-205ENST00000418258 GOLGA8HP0CJ92 632 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 PTPREP23469 700 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 PNOCQ13519 176 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 MYOCDQ8IZQ8 938 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 CHMP6Q96FZ7 201 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 ARMCX5Q6P1M9 558 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 CEP120Q8N960 986 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 WDR62O43379 1518 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 TMEM232C9JQI7 657 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 RINT1Q6NUQ1 792 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 TMTC1Q8IUR5 882 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 OTUD7AQ8TE49 926 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-205ENST00000418258 MIS12Q9H081 205 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 NFE2L3Q9Y4A8 694 aa12.32□□□□□ -0.44
PTCH1-205ENST00000418258 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 SF3A3Q12874 501 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 RUFY4Q6ZNE9 571 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 A6NJR5 290 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 TTC31Q49AM3 519 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-205ENST00000418258 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
PTCH1-205ENST00000418258 CCDC127Q96BQ5 260 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms