RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 U2AF1L4Q8WU68 220 aaKnown RBP12.1□□□□□ -0.47
HDLBP-206ENST00000417540 FGD4Q96M96 766 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 DSCC1Q9BVC3 393 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 ADAMTS5Q9UNA0 930 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 ZNF536O15090 1300 aa12.1□□□□□ -0.47
HDLBP-206ENST00000417540 SGSM2O43147 1006 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
HDLBP-206ENST00000417540 MCCP23508 829 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 GJA8P48165 433 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-206ENST00000417540 FXR1P51114 621 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDLBP-206ENST00000417540 CACNB2Q08289 660 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-206ENST00000417540 CYB5R4Q7L1T6 521 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
HDLBP-206ENST00000417540 TMEM47Q9BQJ4 181 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 SENP2Q9HC62 589 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 HOMER2Q9NSB8 354 aa12.09□□□□□ -0.47
HDLBP-206ENST00000417540 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 KDM4AO75164 1064 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 FARP2O94887 1054 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-206ENST00000417540 IGHA2P01877 340 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 CYP21A2P08686 494 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 BMP3P12645 472 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 SLC16A2P36021 539 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 CCNA1P78396 465 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 CCDC174Q6PII3 467 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 RIOX2Q8IUF8 465 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 CCAR1Q8IX12 1150 aaKnown RBP12.08□□□□□ -0.48
HDLBP-206ENST00000417540 CPXCR1Q8N123 301 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 MKL1Q969V6 931 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 SLC38A10Q9HBR0 1119 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 CDH23Q9H251 3354 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 ASTN1O14525 1302 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 TNKSO95271 1327 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 CEP290O15078 2479 aa12.08□□□□□ -0.48
HDLBP-206ENST00000417540 SLC15A5A6NIM6 579 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 HIP1O00291 1037 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 GJB1P08034 283 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 GOLGA8HP0CJ92 632 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 PDHBP11177 359 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 CYBAP13498 195 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 PTGS1P23219 599 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 SLC1A4P43007 532 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 IKQ13123 557 aaPredicted RBP12.07□□□□□ -0.48
HDLBP-206ENST00000417540 MB21D1Q8N884 522 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 GMCL1Q96IK5 515 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 AGBL1Q96MI9 1066 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 MMP19Q99542 508 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 ZNF287Q9HBT7 754 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 PFASO15067 1338 aa12.07□□□□□ -0.48
HDLBP-206ENST00000417540 EYSQ5T1H1 3165 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 ZNF213O14771 459 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 STAT2P52630 851 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 ANTXR2P58335 489 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 MUM1L1Q5H9M0 696 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 PRAMEF19Q5SWL8 479 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 MFSD6Q6ZSS7 791 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 CHST3Q7LGC8 479 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 ENAHQ8N8S7 591 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-206ENST00000417540 MAML3Q96JK9 1138 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 PURBQ96QR8 312 aaKnown RBP12.06□□□□□ -0.48
HDLBP-206ENST00000417540 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 LSG1Q9H089 658 aaKnown RBP12.06□□□□□ -0.48
HDLBP-206ENST00000417540 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-206ENST00000417540 PRR12Q9ULL5 1215 aa12.06□□□□□ -0.48
HDLBP-206ENST00000417540 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
HDLBP-206ENST00000417540 BAZ2BQ9UIF8 2168 aaKnown RBP12.06□□□□□ -0.48
HDLBP-206ENST00000417540 ADCY6O43306 1168 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 HOXC6P09630 235 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 XRCC5P13010 732 aaKnown RBP12.05□□□□□ -0.48
HDLBP-206ENST00000417540 STAT3P40763 770 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 MFAP1P55081 439 aaKnown RBP12.05□□□□□ -0.48
HDLBP-206ENST00000417540 IMMTQ16891 758 aaKnown RBP12.05□□□□□ -0.48
HDLBP-206ENST00000417540 SLC35G1Q2M3R5 365 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 ESYT1Q9BSJ8 1104 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 RNF146Q9NTX7 359 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 HOXC10Q9NYD6 342 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 FEM1BQ9UK73 627 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-206ENST00000417540 RPTORQ8N122 1335 aa12.05□□□□□ -0.48
HDLBP-206ENST00000417540 SGPL1O95470 568 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 SNHG28P0DPA3 235 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
HDLBP-206ENST00000417540 IRX5P78411 483 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-206ENST00000417540 ZNF543Q08ER8 600 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 ZNF792Q3KQV3 632 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 SYDE2Q5VT97 1194 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 LHX8Q68G74 356 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 SLC30A10Q6XR72 485 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 TICAM2Q86XR7 235 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 DCAF4Q8WV16 495 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 ESR2Q92731 530 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 CCDC136Q96JN2 1154 aa12.04□□□□□ -0.48
HDLBP-206ENST00000417540 RANBP17Q9H2T7 1088 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms