RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 ATP6V0A2Q9Y487 856 aa14.29□□□□□ -0.12
SCAF8-203ENST00000417268 CHRNA5P30532 468 aa14.29□□□□□ -0.12
SCAF8-203ENST00000417268 FANCCQ00597 558 aa14.29□□□□□ -0.12
SCAF8-203ENST00000417268 GADL1Q6ZQY3 521 aa14.29□□□□□ -0.12
SCAF8-203ENST00000417268 NOSTRINQ8IVI9 506 aa14.29□□□□□ -0.12
SCAF8-203ENST00000417268 IMPACTQ9P2X3 320 aa14.29□□□□□ -0.12
SCAF8-203ENST00000417268 PAGR1Q9BTK6 254 aa14.29□□□□□ -0.12
SCAF8-203ENST00000417268 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
SCAF8-203ENST00000417268 KIF5AQ12840 1032 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 NECTIN1Q15223 517 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 RNF26Q9BY78 433 aaPredicted RBP14.28□□□□□ -0.12
SCAF8-203ENST00000417268 CCDC172P0C7W6 258 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 KRT83P78385 493 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 ZNF277Q9NRM2 450 aaPredicted RBP14.28□□□□□ -0.12
SCAF8-203ENST00000417268 SUGT1Q9Y2Z0 365 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 ARMC9Q7Z3E5 817 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 SPAG5Q96R06 1193 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 ZSWIM5Q9P217 1185 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
SCAF8-203ENST00000417268 AKR1B15C9JRZ8 316 aaPredicted RBP14.27□□□□□ -0.12
SCAF8-203ENST00000417268 POLR2MP0CAP2 368 aa14.27□□□□□ -0.12
SCAF8-203ENST00000417268 INPP5BP32019 993 aa14.27□□□□□ -0.12
SCAF8-203ENST00000417268 LIFRP42702 1097 aa14.27□□□□□ -0.12
SCAF8-203ENST00000417268 SSR1P43307 286 aaKnown RBP14.27□□□□□ -0.12
SCAF8-203ENST00000417268 GNPTABQ3T906 1256 aa14.27□□□□□ -0.12
SCAF8-203ENST00000417268 NCAPH2Q6IBW4 605 aa14.27□□□□□ -0.12
SCAF8-203ENST00000417268 TBC1D16Q8TBP0 767 aa14.27□□□□□ -0.12
SCAF8-203ENST00000417268 RABEP2Q9H5N1 569 aa14.27□□□□□ -0.12
SCAF8-203ENST00000417268 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.12
SCAF8-203ENST00000417268 KIF1AQ12756 1690 aa14.27□□□□□ -0.12
SCAF8-203ENST00000417268 NDUFAB1O14561 156 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 GDF11O95390 407 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 CDK8P49336 464 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 EZH2Q15910 746 aaKnown RBP14.27□□□□□ -0.13
SCAF8-203ENST00000417268 NLRX1Q86UT6 975 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 DYNLL2Q96FJ2 89 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 UTYO14607 1347 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 TNS2Q63HR2 1409 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.13
SCAF8-203ENST00000417268 ARHGEF35A5YM69 484 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 FOSP01100 380 aaPredicted RBP14.27□□□□□ -0.13
SCAF8-203ENST00000417268 SCRN1Q12765 414 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 SH3RF3Q8TEJ3 882 aaPredicted RBP14.27□□□□□ -0.13
SCAF8-203ENST00000417268 KIF20BQ96Q89 1820 aa14.27□□□□□ -0.13
SCAF8-203ENST00000417268 COL3A1P02461 1466 aaPredicted RBP14.27□□□□□ -0.13
SCAF8-203ENST00000417268 CYP2D7A0A087X1C5 515 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 RPL13P26373 211 aaKnown RBP14.26□□□□□ -0.13
SCAF8-203ENST00000417268 VAV2P52735 878 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 CCDC125Q86Z20 511 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 FBXO18Q8NFZ0 1043 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 POLR2DO15514 142 aaKnown RBP14.26□□□□□ -0.13
SCAF8-203ENST00000417268 NAA25Q14CX7 972 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 TTC14Q96N46 770 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 MROH7-TTC4A0A0A0MT08 1334 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 KDM6AO15550 1401 aaPredicted RBP14.26□□□□□ -0.13
SCAF8-203ENST00000417268 DGKHQ86XP1 1220 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 CNGA4Q8IV77 575 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 ARFGAP2Q8N6H7 521 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 DNM3Q9UQ16 869 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 A0A0G2JLW4 131 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 ARHGAP6O43182 974 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 IREB2P48200 963 aaKnown RBP14.26□□□□□ -0.13
SCAF8-203ENST00000417268 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 IMPG2Q9BZV3 1241 aa14.26□□□□□ -0.13
SCAF8-203ENST00000417268 SH2B2O14492 632 aaPredicted RBP14.25□□□□□ -0.13
SCAF8-203ENST00000417268 ASNSP08243 561 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 BMP3P12645 472 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 SMTNP53814 917 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 CPLX4Q7Z7G2 160 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 TDRD3Q9H7E2 651 aaKnown RBP14.25□□□□□ -0.13
SCAF8-203ENST00000417268 MMRN2Q9H8L6 949 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 CCPG1Q9ULG6 757 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 B4GALNT4Q76KP1 1039 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 ANKRD35Q8N283 1001 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 IFT81Q8WYA0 676 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 NAPGQ99747 312 aaPredicted RBP14.25□□□□□ -0.13
SCAF8-203ENST00000417268 CFAP58Q5T655 872 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 TMEM179Q6ZVK1 233 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 NEK8Q86SG6 692 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 TMEM87AQ8NBN3 555 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 KIAA1524Q8TCG1 905 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 CCDC42Q96M95 316 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 MKRN1Q9UHC7 482 aaKnown RBP14.25□□□□□ -0.13
SCAF8-203ENST00000417268 DEFB132Q7Z7B7 95 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 ANKS4BQ8N8V4 417 aa14.25□□□□□ -0.13
SCAF8-203ENST00000417268 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.132e-9■□□□□ 9.5
SCAF8-203ENST00000417268 BTBD18B2RXH4 712 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 GAS7O60861 476 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 CCDC122Q5T0U0 273 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 RNF181Q9P0P0 153 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 MTMR6Q9Y217 621 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 GOLGA6CA6NDK9 693 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 GOLGA6DP0CG33 693 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 ARHGEF16Q5VV41 709 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 STYK1Q6J9G0 422 aa14.24□□□□□ -0.13
SCAF8-203ENST00000417268 MIGA2Q7L4E1 593 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms