RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 RIOK1Q9BRS2 568 aaKnown RBP14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 TRIM34Q9BYJ4 488 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 TAB2Q9NYJ8 693 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 RWDD2AQ9UIY3 292 aa14.44□□□□□ -0.1
LRRTM1-205ENST00000417012 MYO1CO00159 1063 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 N4BP1O75113 896 aaKnown RBP14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 KRT9P35527 623 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 ARHGAP25P42331 645 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 UBE4AQ14139 1066 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 PKN1Q16512 942 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 SETDB2Q96T68 719 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 SLF1Q9BQI6 1058 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 PYM1Q9BRP8 204 aaKnown RBP14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 XDHP47989 1333 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 CACNA1SQ13698 1873 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 hCG_1642624A0A1W2PR95 340 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 TOM1O60784 492 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 COBLO75128 1261 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 ABL1P00519 1130 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 SEC23AQ15436 765 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 CCDC148Q8NFR7 591 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 BLZF1Q9H2G9 400 aa14.43□□□□□ -0.1
LRRTM1-205ENST00000417012 LRRC10BA6NIK2 292 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 KCNJ18B7U540 433 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 PRPF3O43395 683 aaKnown RBP14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 CDC25AP30304 524 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 KCNJ12Q14500 433 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 SLC4A8Q2Y0W8 1093 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 CATIPQ7Z7H3 387 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 V9GY48 417 aaPredicted RBP14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 ZPR1O75312 459 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 RPS8P62241 208 aaKnown RBP14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 ATP2C1P98194 919 aaPredicted RBP14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 PTGDRQ13258 359 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 TCP11X2Q5H9J9 407 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 SRLQ86TD4 932 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 NOA1Q8NC60 698 aaKnown RBP14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 ZBTB9Q96C00 473 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 MED4Q9NPJ6 270 aa14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 RBM28Q9NW13 759 aaKnown RBP14.42□□□□□ -0.1
LRRTM1-205ENST00000417012 WNT7AO00755 349 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 GTPBP6O43824 516 aaPredicted RBP14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 AMPD2Q01433 879 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 IFIT1BQ5T764 474 aaKnown RBP14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 NCAPH2Q6IBW4 605 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 TXNRD3Q86VQ6 643 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 C10orf67Q8IYJ2 551 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 NELFBQ8WX92 580 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 RMND1Q9NWS8 449 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 RRP15Q9Y3B9 282 aaKnown RBP14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 VPS72Q15906 364 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 WDR93Q6P2C0 686 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 NARFQ9UHQ1 456 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 GUCA1BQ9UMX6 200 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 MYH13Q9UKX3 1938 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 CNTNAP4Q9C0A0 1308 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 PLEKHA8P1O95397 391 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 UBXN1Q04323 297 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 E2F4Q16254 413 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 ZSCAN10Q96SZ4 725 aaPredicted RBP14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 LCMT1Q9UIC8 334 aa14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 CCNL1Q9UK58 526 aaPredicted RBP14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 EPN1Q9Y6I3 576 aaPredicted RBP14.41□□□□□ -0.1
LRRTM1-205ENST00000417012 RNF225M0QZC1 329 aaPredicted RBP14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 NDUFA10O95299 355 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 MCM3P25205 808 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 PRDX5P30044 214 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 FUT2Q10981 343 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 ZNF658Q5TYW1 1059 aaPredicted RBP14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 GOLGA6L1Q8N7Z2 621 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 PHACTR2O75167 634 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 CALM1P0DP23 149 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 CALM2P0DP24 149 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 CALM3P0DP25 149 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 TNNT3P45378 269 aaPredicted RBP14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 MECOMQ03112 1051 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 MAP9Q49MG5 647 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 PDXDC2PQ6P474 469 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 IQCA1Q86XH1 822 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 CERS3Q8IU89 383 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 ANAPC4Q9UJX5 808 aa14.4□□□□□ -0.1
LRRTM1-205ENST00000417012 UBAP1LF5GYI3 381 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 RPS6KA5O75582 802 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 RPS6KA4O75676 772 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 TSR1Q2NL82 804 aaKnown RBP14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 SLC10A5Q5PT55 438 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 TNFRSF25Q93038 417 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 HAUS4Q9H6D7 363 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 BTAF1O14981 1849 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 LRRIQ3A6PVS8 624 aaPredicted RBP14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 USP17L12C9JPN9 530 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 USP17L21D6R901 530 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 NMT2O60551 498 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 NOM1Q5C9Z4 860 aaKnown RBP14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 CTR9Q6PD62 1173 aa14.39□□□□□ -0.11
LRRTM1-205ENST00000417012 TRAPPC11Q7Z392 1133 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms