RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 LRP5O75197 1615 aa9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 FYCO1Q9BQS8 1478 aa9.08□□□□□ -0.96
GTF3AP1-201ENST00000416942 BLMP54132 1417 aaPredicted RBP9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 IGF2BP3O00425 579 aaKnown RBP eCLIP9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 DNAJA2O60884 412 aa9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 TCF3P15923 654 aa9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 MCM4P33991 863 aa9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 ZNF165P49910 485 aa9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 OXCT1P55809 520 aa9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 GK5Q6ZS86 529 aa9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 SLFN12Q8IYM2 578 aa9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 MKNK2Q9HBH9 465 aa9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 TPX2Q9ULW0 747 aaKnown RBP9.07□□□□□ -0.96
GTF3AP1-201ENST00000416942 CHURC1-FNTBB4DL54 471 aa9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 CLCQ05315 142 aa9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 RAD51AP2Q09MP3 1159 aa9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 PAK2Q13177 524 aa9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 CDH24Q86UP0 819 aa9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 PLD6Q8N2A8 252 aaKnown RBP9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 NETO1Q8TDF5 533 aa9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 TGIF2Q9GZN2 237 aa9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 MAPK8IP1Q9UQF2 711 aa9.06□□□□□ -0.96
GTF3AP1-201ENST00000416942 CNTNAP4Q9C0A0 1308 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 ATRNO75882 1429 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 NCOA3Q9Y6Q9 1424 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 CEP152O94986 1710 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 CEP350Q5VT06 3117 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 CAMSAP2Q08AD1 1489 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 CEACAM5P06731 702 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 ZNF746Q6NUN9 644 aaPredicted RBP9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 CYB5D2Q8WUJ1 264 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 BSDC1Q9NW68 430 aaPredicted RBP9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 ASXL1Q8IXJ9 1541 aa9.05□□□□□ -0.96
GTF3AP1-201ENST00000416942 SLC22A31A6NKX4 558 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 E9PSI1 815 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 PRNPP04156 253 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 ITIH2P19823 946 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 R3HDM1Q15032 1099 aaKnown RBP9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 SFRP5Q5T4F7 317 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 DNAJB8Q8NHS0 232 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 GMIPQ9P107 970 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 TBX22Q9Y458 520 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 MROH1Q8NDA8 1641 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 ARHGAP31Q2M1Z3 1444 aa9.04□□□□□ -0.96
GTF3AP1-201ENST00000416942 GNAT3A8MTJ3 354 aa9.03□□□□□ -0.96
GTF3AP1-201ENST00000416942 PPP1R13LQ8WUF5 828 aa9.03□□□□□ -0.96
GTF3AP1-201ENST00000416942 ACBD3Q9H3P7 528 aa9.03□□□□□ -0.96
GTF3AP1-201ENST00000416942 PLAGL2Q9UPG8 496 aa9.03□□□□□ -0.96
GTF3AP1-201ENST00000416942 CEP131Q9UPN4 1083 aa9.03□□□□□ -0.96
GTF3AP1-201ENST00000416942 UTRNP46939 3433 aa9.02□□□□□ -0.96
GTF3AP1-201ENST00000416942 PLEKHG1Q9ULL1 1385 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 ADAMTS4O75173 837 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 CYP7A1P22680 504 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 ERCC5P28715 1186 aaPredicted RBP9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 ETV3P41162 512 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 IFI16Q16666 785 aaKnown RBP9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 ARSHQ5FYA8 562 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 OVOS1Q6IE37 1185 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 C22orf34Q6ZV56 151 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 PHACTR4Q8IZ21 702 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 GPRASP2Q96D09 838 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 CCDC74BQ96LY2 380 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 CCSER2Q9H7U1 834 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 CCDC39Q9UFE4 941 aa9.02□□□□□ -0.97
GTF3AP1-201ENST00000416942 CHD2O14647 1828 aaKnown RBP9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 PRR33A8MZF0 331 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 ZNF865P0CJ78 1059 aaPredicted RBP9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 GJA8P48165 433 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 MST1RQ04912 1400 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 NKPD1Q17RQ9 610 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 VSIG10LQ86VR7 867 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 BAHD1Q8TBE0 780 aaPredicted RBP9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 RASGRP4Q8TDF6 673 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 COX4I2Q96KJ9 171 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 SPATA32Q96LK8 384 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 TNKS2Q9H2K2 1166 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 ZNRF3Q9ULT6 936 aa9.01□□□□□ -0.97
GTF3AP1-201ENST00000416942 TMEM265A0A087WTH1 108 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 WNT11O96014 354 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 TNNI2P48788 182 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 LRRFIP1Q32MZ4 808 aaKnown RBP9□□□□□ -0.97
GTF3AP1-201ENST00000416942 CDCP2Q5VXM1 449 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 NBPF11Q86T75 865 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 SPACA3Q8IXA5 215 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 MFSD4AQ8N468 514 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 KIF2CQ99661 725 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 ANTXR1Q9H6X2 564 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 ANGEL1Q9UNK9 670 aaKnown RBP9□□□□□ -0.97
GTF3AP1-201ENST00000416942 NHSL1Q5SYE7 1610 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 BCL9LQ86UU0 1499 aa9□□□□□ -0.97
GTF3AP1-201ENST00000416942 CEP162Q5TB80 1403 aa8.99□□□□□ -0.97
GTF3AP1-201ENST00000416942 RIMS2Q9UQ26 1411 aa8.99□□□□□ -0.97
GTF3AP1-201ENST00000416942 MEIS3P2A8K0S8 358 aa8.99□□□□□ -0.97
GTF3AP1-201ENST00000416942 RBAK-RBAKDNI3L0D1 243 aa8.99□□□□□ -0.97
GTF3AP1-201ENST00000416942 CBX7O95931 251 aa8.99□□□□□ -0.97
GTF3AP1-201ENST00000416942 RAG1P15918 1043 aa8.99□□□□□ -0.97
GTF3AP1-201ENST00000416942 COL9A2Q14055 689 aaPredicted RBP8.99□□□□□ -0.97
GTF3AP1-201ENST00000416942 NFXL1Q6ZNB6 911 aa8.99□□□□□ -0.97
GTF3AP1-201ENST00000416942 BCL7CQ8WUZ0 217 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms