RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 COPB2P35606 906 aa21.21■□□□□ 0.99
CPNE1-210ENST00000416778 NOVP48745 357 aa21.21■□□□□ 0.99
CPNE1-210ENST00000416778 ZNF589Q86UQ0 364 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-210ENST00000416778 DIS3Q9Y2L1 958 aaKnown RBP21.21■□□□□ 0.99
CPNE1-210ENST00000416778 A0A0G2JMZ2 1700 aa21.21■□□□□ 0.99
CPNE1-210ENST00000416778 ORC4O43929 436 aa21.2■□□□□ 0.98
CPNE1-210ENST00000416778 NMT2O60551 498 aa21.2■□□□□ 0.98
CPNE1-210ENST00000416778 BMP3P12645 472 aa21.2■□□□□ 0.98
CPNE1-210ENST00000416778 FXR1P51114 621 aaKnown RBP eCLIP21.2■□□□□ 0.98
CPNE1-210ENST00000416778 KCTD2Q14681 263 aa21.2■□□□□ 0.98
CPNE1-210ENST00000416778 KIFC2Q96AC6 838 aa21.2■□□□□ 0.98
CPNE1-210ENST00000416778 TEX13BQ9BXU2 312 aa21.2■□□□□ 0.98
CPNE1-210ENST00000416778 SLC38A10Q9HBR0 1119 aa21.2■□□□□ 0.98
CPNE1-210ENST00000416778 TSPY2A6NKD2 308 aa21.19■□□□□ 0.98
CPNE1-210ENST00000416778 RANBP6O60518 1105 aaKnown RBP21.19■□□□□ 0.98
CPNE1-210ENST00000416778 PPP4R3BQ5MIZ7 849 aa21.19■□□□□ 0.98
CPNE1-210ENST00000416778 SNRNP48Q6IEG0 339 aaKnown RBP21.19■□□□□ 0.98
CPNE1-210ENST00000416778 CPXCR1Q8N123 301 aa21.19■□□□□ 0.98
CPNE1-210ENST00000416778 GMCL1Q96IK5 515 aa21.19■□□□□ 0.98
CPNE1-210ENST00000416778 TRIOBPQ9H2D6 2365 aa21.18■□□□□ 0.98
CPNE1-210ENST00000416778 TMEM232C9JQI7 657 aa21.18■□□□□ 0.98
CPNE1-210ENST00000416778 SEPT4O43236 478 aa21.18■□□□□ 0.98
CPNE1-210ENST00000416778 MCCP23508 829 aa21.18■□□□□ 0.98
CPNE1-210ENST00000416778 C7orf61Q8IZ16 206 aa21.18■□□□□ 0.98
CPNE1-210ENST00000416778 STAG1Q8WVM7 1258 aa21.18■□□□□ 0.98
CPNE1-210ENST00000416778 TINF2Q9BSI4 451 aa21.18■□□□□ 0.98
CPNE1-210ENST00000416778 RAVER2Q9HCJ3 691 aaKnown RBP21.18■□□□□ 0.98
CPNE1-210ENST00000416778 PLA2G6O60733 806 aa21.17■□□□□ 0.98
CPNE1-210ENST00000416778 RCSD1Q6JBY9 416 aa21.17■□□□□ 0.98
CPNE1-210ENST00000416778 CHURC1Q8WUH1 139 aa21.17■□□□□ 0.98
CPNE1-210ENST00000416778 SENP6Q9GZR1 1112 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-210ENST00000416778 NRBP1Q9UHY1 535 aa21.17■□□□□ 0.98
CPNE1-210ENST00000416778 STX8Q9UNK0 236 aa21.17■□□□□ 0.98
CPNE1-210ENST00000416778 PARP14Q460N5 1801 aa21.17■□□□□ 0.98
CPNE1-210ENST00000416778 CCDC171Q6TFL3 1326 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 DNAJC25-GNG10A0A024R161 153 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 FDX1P10109 184 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 SLC1A4P43007 532 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 SLC4A3P48751 1232 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 OAZ1P54368 228 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 LRRC26Q2I0M4 334 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 ANO1Q5XXA6 986 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.16■□□□□ 0.983e-8■□□□□ 9.3
CPNE1-210ENST00000416778 ARRDC4Q8NCT1 418 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 TCP11L1Q9NUJ3 509 aa21.16■□□□□ 0.98
CPNE1-210ENST00000416778 CTDP1Q9Y5B0 961 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-210ENST00000416778 ZNF236Q9UL36 1845 aa21.15■□□□□ 0.98
CPNE1-210ENST00000416778 ZMYM6O95789 1325 aa21.15■□□□□ 0.98
CPNE1-210ENST00000416778 DNM1LO00429 736 aa21.15■□□□□ 0.98
CPNE1-210ENST00000416778 TAL1P17542 331 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-210ENST00000416778 GJC2Q5T442 439 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-210ENST00000416778 FAM160B2Q86V87 743 aa21.15■□□□□ 0.98
CPNE1-210ENST00000416778 CHMP4CQ96CF2 233 aa21.15■□□□□ 0.98
CPNE1-210ENST00000416778 DDX11Q96FC9 970 aa21.15■□□□□ 0.98
CPNE1-210ENST00000416778 GDF15Q99988 308 aa21.15■□□□□ 0.98
CPNE1-210ENST00000416778 ZMYND8Q9ULU4 1186 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-210ENST00000416778 ZNFX1Q9P2E3 1918 aaKnown RBP21.15■□□□□ 0.98
CPNE1-210ENST00000416778 DNAH12Q6ZR08 3092 aa21.15■□□□□ 0.98
CPNE1-210ENST00000416778 ZNF865P0CJ78 1059 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-210ENST00000416778 STAT2P52630 851 aa21.14■□□□□ 0.97
CPNE1-210ENST00000416778 CHST13Q8NET6 341 aa21.14■□□□□ 0.97
CPNE1-210ENST00000416778 COL11A1P12107 1806 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-210ENST00000416778 ZNF536O15090 1300 aa21.13■□□□□ 0.97
CPNE1-210ENST00000416778 SNAI1O95863 264 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-210ENST00000416778 SYN1P17600 705 aa21.13■□□□□ 0.97
CPNE1-210ENST00000416778 BMP8BP34820 402 aa21.13■□□□□ 0.97
CPNE1-210ENST00000416778 MFAP1P55081 439 aaKnown RBP21.13■□□□□ 0.97
CPNE1-210ENST00000416778 HAND2P61296 217 aa21.13■□□□□ 0.97
CPNE1-210ENST00000416778 CWC27Q6UX04 472 aaKnown RBP21.13■□□□□ 0.97
CPNE1-210ENST00000416778 MAMDC4Q6UXC1 1216 aa21.13■□□□□ 0.97
CPNE1-210ENST00000416778 KCTD1Q719H9 257 aa21.13■□□□□ 0.97
CPNE1-210ENST00000416778 MSL3Q8N5Y2 521 aaKnown RBP21.13■□□□□ 0.97
CPNE1-210ENST00000416778 PDE4AP27815 886 aa21.12■□□□□ 0.97
CPNE1-210ENST00000416778 RRP12Q5JTH9 1297 aaKnown RBP21.12■□□□□ 0.97
CPNE1-210ENST00000416778 AKNAD1Q5T1N1 836 aa21.12■□□□□ 0.97
CPNE1-210ENST00000416778 MFSD6Q6ZSS7 791 aa21.12■□□□□ 0.97
CPNE1-210ENST00000416778 AGBL1Q96MI9 1066 aa21.12■□□□□ 0.97
CPNE1-210ENST00000416778 TMEM47Q9BQJ4 181 aa21.12■□□□□ 0.97
CPNE1-210ENST00000416778 TOMM22Q9NS69 142 aa21.12■□□□□ 0.97
CPNE1-210ENST00000416778 FBXO40Q9UH90 709 aa21.12■□□□□ 0.97
CPNE1-210ENST00000416778 TOP1P11387 765 aaKnown RBP21.11■□□□□ 0.97
CPNE1-210ENST00000416778 PCP11498 1178 aaKnown RBP21.11■□□□□ 0.97
CPNE1-210ENST00000416778 LRRC41Q15345 812 aa21.11■□□□□ 0.97
CPNE1-210ENST00000416778 ZNF467Q7Z7K2 595 aaPredicted RBP21.11■□□□□ 0.97
CPNE1-210ENST00000416778 ANKRD35Q8N283 1001 aa21.11■□□□□ 0.97
CPNE1-210ENST00000416778 TTC14Q96N46 770 aa21.11■□□□□ 0.97
CPNE1-210ENST00000416778 PCDH10Q9P2E7 1040 aa21.11■□□□□ 0.97
CPNE1-210ENST00000416778 PRR12Q9ULL5 1215 aa21.11■□□□□ 0.97
CPNE1-210ENST00000416778 ALPK3Q96L96 1907 aa21.11■□□□□ 0.97
CPNE1-210ENST00000416778 MYH4Q9Y623 1939 aa21.11■□□□□ 0.97
CPNE1-210ENST00000416778 A0A1W2PPC1 479 aa21.1■□□□□ 0.97
CPNE1-210ENST00000416778 HIP1O00291 1037 aa21.1■□□□□ 0.97
CPNE1-210ENST00000416778 ATN1P54259 1190 aaPredicted RBP21.1■□□□□ 0.97
CPNE1-210ENST00000416778 SNAP25P60880 206 aa21.1■□□□□ 0.97
CPNE1-210ENST00000416778 SLC39A5Q6ZMH5 540 aa21.1■□□□□ 0.97
CPNE1-210ENST00000416778 RASGRP2Q7LDG7 609 aa21.1■□□□□ 0.97
CPNE1-210ENST00000416778 TBC1D10CQ8IV04 446 aa21.1■□□□□ 0.97
CPNE1-210ENST00000416778 FGD4Q96M96 766 aa21.1■□□□□ 0.97
CPNE1-210ENST00000416778 ISY1Q9ULR0 285 aaKnown RBP21.1■□□□□ 0.97
CPNE1-210ENST00000416778 SYNGAP1Q96PV0 1343 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms