RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 GPR161Q8N6U8 529 aaKnown RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 GPATCH11Q8N954 259 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 SECISBP2LQ93073 1101 aaKnown RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ASIC3Q9UHC3 531 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 IGSF3O75054 1194 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 STK10O94804 968 aaKnown RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 PPP2R5BQ15173 497 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 SCYL2Q6P3W7 929 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 USP6P35125 1406 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ZNF772Q68DY9 489 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 PI16Q6UXB8 463 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 UNC5CLQ8IV45 518 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 NAP1L3Q99457 506 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 DMP1Q13316 513 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 MORC3Q14149 939 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ZNF827Q17R98 1081 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ZNF274Q96GC6 653 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 CHAMP1Q96JM3 812 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ANTXR1Q9H6X2 564 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 DBNLQ9UJU6 430 aaKnown RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 PTGDRQ13258 359 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 ZNF589Q86UQ0 364 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-203ENST00000416123 SMC6Q96SB8 1091 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 PPP1R16BQ96T49 567 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 NT5C3AQ9H0P0 336 aa11.75□□□□□ -0.53
COL12A1-203ENST00000416123 CLTCQ00610 1675 aaKnown RBP11.74□□□□□ -0.53
COL12A1-203ENST00000416123 BTBD18B2RXH4 712 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 PRKAB2O43741 272 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 SLFN12Q8IYM2 578 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 PCDHA1Q9Y5I3 950 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 UBN2Q6ZU65 1347 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 SYNJ2BP-COX16A0A087WUM0 186 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 NEK8Q86SG6 692 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 COX16Q9P0S2 106 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 ATP7BP35670 1465 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 CYP2D7A0A087X1C5 515 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.74□□□□□ -0.53
COL12A1-203ENST00000416123 KCNJ18B7U540 433 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 PKP1Q13835 747 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 KCNJ12Q14500 433 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 TEKT3Q9BXF9 490 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 LPXNO60711 386 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
COL12A1-203ENST00000416123 ADAT2Q7Z6V5 191 aaKnown RBP11.74□□□□□ -0.53
COL12A1-203ENST00000416123 PIGBQ92521 554 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 PKNOX2Q96KN3 472 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 CCDC160A6NGH7 325 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-203ENST00000416123 CCDC89Q8N998 374 aa11.74□□□□□ -0.53
COL12A1-203ENST00000416123 U2AF1L4Q8WU68 220 aaKnown RBP11.74□□□□□ -0.53
COL12A1-203ENST00000416123 ERVK-7P63135 1459 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 CCDC127Q96BQ5 260 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 CARD6Q9BX69 1037 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 AKT3Q9Y243 479 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 MAP3K4Q9Y6R4 1608 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 OR52Z1P0C646 297 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 USP17L8P0C7I0 530 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 NDUFA8P51970 172 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 ADCK5Q3MIX3 580 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 CCDC121Q6ZUS5 278 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 HACE1Q8IYU2 909 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 KIAA1524Q8TCG1 905 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 TBC1D31Q96DN5 1066 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 PFDN4Q9NQP4 134 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 SEPT10Q9P0V9 454 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 HDXQ7Z353 690 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 PEX26Q7Z412 305 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 FAM178BQ8IXR5 827 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 SYMPKQ92797 1274 aaKnown RBP11.73□□□□□ -0.53
COL12A1-203ENST00000416123 USP28Q96RU2 1077 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 POMGNT1Q8WZA1 660 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 KIF24Q5T7B8 1368 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 MYSM1Q5VVJ2 828 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 NLRP10Q86W26 655 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 TTC14Q96N46 770 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 LMBRD1Q9NUN5 540 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 P4HA1P13674 534 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 MCF2L2Q86YR7 1114 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 CCDC125Q86Z20 511 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 CCDC105Q8IYK2 499 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 MYOCDQ8IZQ8 938 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 BUB1O43683 1085 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 HSPA1LP34931 641 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 PIK3CAP42336 1068 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 KRT81Q14533 505 aa11.73□□□□□ -0.53
COL12A1-203ENST00000416123 TTLL1O95922 423 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 MNAT1P51948 309 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 SEPT12Q8IYM1 358 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 XPO4Q9C0E2 1151 aaKnown RBP11.72□□□□□ -0.53
COL12A1-203ENST00000416123 KIAA1024Q9UPX6 916 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 LEMD3Q9Y2U8 911 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 MAGEA1P43355 309 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
COL12A1-203ENST00000416123 DYNLL2Q96FJ2 89 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 618.9 ms