RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.75□□□□□ -0.69
CHRNA1-206ENST00000416004 PPFIA3O75145 1194 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 RASA1P20936 1047 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 GJB2P29033 226 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 PPP4R3BQ5MIZ7 849 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 APOA5Q6Q788 366 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 LPAR1Q92633 364 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 C12orf42Q96LP6 360 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 ZSCAN10Q96SZ4 725 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 UBAC1Q9BSL1 405 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 TANGO6Q9C0B7 1094 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 SMC3Q9UQE7 1217 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 ZSWIM8A7E2V4 1837 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 RBBP6Q7Z6E9 1792 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 RAD21O60216 631 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 MAPK4P31152 587 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 TFAP4Q01664 338 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 WTAPQ15007 396 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 NFXL1Q6ZNB6 911 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 NSUN7Q8NE18 718 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 PAGR1Q9BTK6 254 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 ZMYND15Q9H091 742 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 IL17RBQ9NRM6 502 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 EMILIN3Q9NT22 766 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 HOXC10Q9NYD6 342 aa10.74□□□□□ -0.69
CHRNA1-206ENST00000416004 TSPY2A6NKD2 308 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 JAG1P78504 1218 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 PRKCZQ05513 592 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 SART3Q15020 963 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 MICU3Q86XE3 530 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 CCDC144CPQ8IYA2 1237 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 ZNF333Q96JL9 665 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 P2RX7Q99572 595 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 MTA3Q9BTC8 594 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 RPAP3Q9H6T3 665 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 MORF4L1Q9UBU8 362 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 RABGAP1Q9Y3P9 1069 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 IVNS1ABPQ9Y6Y0 642 aa10.73□□□□□ -0.69
CHRNA1-206ENST00000416004 CCDC69A6NI79 296 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 ADCY3O60266 1144 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 CAPN2P17655 700 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 VCAM1P19320 739 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 CDC27P30260 824 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 WDR78Q5VTH9 848 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 FOXD4L5Q5VV16 416 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 RCSD1Q6JBY9 416 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 CATSPERGQ6ZRH7 1159 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 TRMT44Q8IYL2 757 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 SMARCC2Q8TAQ2 1214 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 SH3TC2Q8TF17 1288 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 SOCS4Q8WXH5 440 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 FOXD4L4Q8WXT5 416 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 TNPO1Q92973 898 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 SLC12A7Q9Y666 1083 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 ERICH2A1L162 156 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 ZBTB43O43298 467 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 MYCP01106 439 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 TSPY3P0CV98 308 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 TSPY8P0CW00 308 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 AKR1B1P15121 316 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 SYT1P21579 422 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 ADD1P35611 737 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 FLT3LGP49771 235 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 ERVK-9P63128 1117 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 ERVK-24P63145 666 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 IRF5Q13568 498 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 COG2Q14746 738 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 SHROOM1Q2M3G4 852 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 IQCA1Q86XH1 822 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 ZNF654Q8IZM8 581 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 ACER1Q8TDN7 264 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 PXYLP1Q8TE99 480 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 DDX11Q96FC9 970 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 NUDT12Q9BQG2 462 aa10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 CTDP1Q9Y5B0 961 aaPredicted RBP10.72□□□□□ -0.69
CHRNA1-206ENST00000416004 MYH4Q9Y623 1939 aa10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 GOLGA8AA7E2F4 631 aa10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 WDR46O15213 610 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 BRD1O95696 1058 aa10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 METAP2P50579 478 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 NUCB2P80303 420 aa10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 IFIT1BQ5T764 474 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 MB21D1Q8N884 522 aa10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 CHAMP1Q96JM3 812 aa10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 LLPHQ9BRT6 129 aaKnown RBP10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 VCPKMTQ9H867 229 aa10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 TMX2Q9Y320 296 aa10.71□□□□□ -0.69
CHRNA1-206ENST00000416004 FLOT1O75955 427 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 FDPSP14324 419 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 GUCY1A2P33402 732 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 NEDD1Q8NHV4 660 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 RNF208Q9H0X6 261 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 GABRQQ9UN88 632 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms