RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 ABLIM1O14639 778 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 IRS4O14654 1257 aaPredicted RBP4.4□□□□□ -1.71
LINC00428-201ENST00000415620 CILPO75339 1184 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 EFEMP2O95967 443 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 VIPR1P32241 457 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 LIG3P49916 1009 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 RPL6Q02878 288 aaKnown RBP4.4□□□□□ -1.71
LINC00428-201ENST00000415620 TMEM201Q5SNT2 666 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 NLRX1Q86UT6 975 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 LINC01356Q8N9X3 169 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 RNF141Q8WVD5 230 aa4.4□□□□□ -1.71
LINC00428-201ENST00000415620 EPB41L4AQ9HCS5 686 aaPredicted RBP4.4□□□□□ -1.71
LINC00428-201ENST00000415620 TOP2AP11388 1531 aaKnown RBP4.4□□□□□ -1.71
LINC00428-201ENST00000415620 ZCCHC11Q5TAX3 1644 aaKnown RBP4.39□□□□□ -1.71
LINC00428-201ENST00000415620 SUV39H1O43463 412 aa4.39□□□□□ -1.71
LINC00428-201ENST00000415620 LRRN2O75325 713 aa4.39□□□□□ -1.71
LINC00428-201ENST00000415620 TFE3P19532 575 aaPredicted RBP4.39□□□□□ -1.71
LINC00428-201ENST00000415620 ATP2B2Q01814 1243 aa4.39□□□□□ -1.71
LINC00428-201ENST00000415620 SLC14A2Q15849 920 aa4.39□□□□□ -1.71
LINC00428-201ENST00000415620 FAM129CQ86XR2 697 aa4.39□□□□□ -1.71
LINC00428-201ENST00000415620 ZSCAN29Q8IWY8 852 aaPredicted RBP4.39□□□□□ -1.71
LINC00428-201ENST00000415620 MZB1Q8WU39 189 aa4.39□□□□□ -1.71
LINC00428-201ENST00000415620 CNOT11Q9UKZ1 510 aaKnown RBP4.39□□□□□ -1.71
LINC00428-201ENST00000415620 FRMPD1Q5SYB0 1578 aa4.39□□□□□ -1.71
LINC00428-201ENST00000415620 KIAA0556O60303 1618 aa4.39□□□□□ -1.71
LINC00428-201ENST00000415620 SHISA3A0PJX4 238 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 YBX1P67809 324 aaKnown RBP4.38□□□□□ -1.71
LINC00428-201ENST00000415620 CCDC85BQ15834 202 aaPredicted RBP4.38□□□□□ -1.71
LINC00428-201ENST00000415620 TSNAXIP1Q2TAA8 658 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 HHIPL2Q6UWX4 724 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 SLFN12Q8IYM2 578 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 TMEFF1Q8IYR6 380 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 VWCEQ96DN2 955 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 MIR1-1HGQ9H1L0 117 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 ZMYM5Q9UJ78 669 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 CORINQ9Y5Q5 1042 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 GTF3C3Q9Y5Q9 886 aa4.38□□□□□ -1.71
LINC00428-201ENST00000415620 ZNF335Q9H4Z2 1342 aaPredicted RBP4.38□□□□□ -1.71
LINC00428-201ENST00000415620 MAGI3Q5TCQ9 1506 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 UPK3BL1B0FP48 263 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 UPK3BL2E5RIL1 263 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 K7ESM1 405 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 AKAP8O43823 692 aaKnown RBP4.37□□□□□ -1.71
LINC00428-201ENST00000415620 NRDCO43847 1150 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 P4HBP07237 508 aaKnown RBP4.37□□□□□ -1.71
LINC00428-201ENST00000415620 PNLIPP16233 465 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 RPL10P27635 214 aaKnown RBP4.37□□□□□ -1.71
LINC00428-201ENST00000415620 GNA15P30679 374 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 KIR2DL1P43626 348 aaPredicted RBP4.37□□□□□ -1.71
LINC00428-201ENST00000415620 KIR2DL2P43627 348 aaPredicted RBP4.37□□□□□ -1.71
LINC00428-201ENST00000415620 KCNC1P48547 511 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 CDR1P51861 262 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 RTP5Q14D33 572 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 ZNF827Q17R98 1081 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 CLEC16AQ2KHT3 1053 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 CRELD1Q96HD1 420 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 PWWP2AQ96N64 755 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 ASPNQ9BXN1 380 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 ARID4BQ4LE39 1312 aaPredicted RBP4.37□□□□□ -1.71
LINC00428-201ENST00000415620 PRR36Q9H6K5 1346 aa4.37□□□□□ -1.71
LINC00428-201ENST00000415620 CUX1P39880 1505 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 ARHGEF40Q8TER5 1519 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 USP2O75604 605 aaPredicted RBP4.36□□□□□ -1.71
LINC00428-201ENST00000415620 BRD1O95696 1058 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 EIF4BP23588 611 aaKnown RBP4.36□□□□□ -1.71
LINC00428-201ENST00000415620 ZFYVE27Q5T4F4 411 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 RNF111Q6ZNA4 994 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 CEP128Q6ZU80 1094 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 CCDC84Q86UT8 332 aaPredicted RBP4.36□□□□□ -1.71
LINC00428-201ENST00000415620 FAM13CQ8NE31 585 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 KREMEN1Q96MU8 473 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 ARAP3Q8WWN8 1544 aa4.36□□□□□ -1.71
LINC00428-201ENST00000415620 PRICKLE3O43900 615 aaPredicted RBP4.35□□□□□ -1.71
LINC00428-201ENST00000415620 MPOP05164 745 aa4.35□□□□□ -1.71
LINC00428-201ENST00000415620 LDHBP07195 334 aaKnown RBP4.35□□□□□ -1.71
LINC00428-201ENST00000415620 PLCG1P19174 1290 aa4.35□□□□□ -1.71
LINC00428-201ENST00000415620 YARSP54577 528 aaKnown RBP4.35□□□□□ -1.71
LINC00428-201ENST00000415620 ZXDAP98168 799 aa4.35□□□□□ -1.71
LINC00428-201ENST00000415620 TMEM62Q0P6H9 643 aa4.35□□□□□ -1.71
LINC00428-201ENST00000415620 LDHDQ86WU2 507 aa4.35□□□□□ -1.71
LINC00428-201ENST00000415620 ASCC2Q9H1I8 757 aaPredicted RBP4.35□□□□□ -1.71
LINC00428-201ENST00000415620 AK5Q9Y6K8 562 aa4.35□□□□□ -1.71
LINC00428-201ENST00000415620 SSU72P8A0A1W2PR75 194 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 FAM221AA4D161 298 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 RLBP1P12271 317 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 SDHBP21912 280 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 TNNI2P48788 182 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 ERVFRD-1P60508 538 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 CAP1Q01518 475 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 MAP3K11Q16584 847 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 UBXN11Q5T124 520 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 DIEXFQ68CQ4 756 aaKnown RBP4.34□□□□□ -1.71
LINC00428-201ENST00000415620 WAPLQ7Z5K2 1190 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 IGDCC3Q8IVU1 814 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 NLGN1Q8N2Q7 840 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 USHBP1Q8N6Y0 703 aa4.34□□□□□ -1.71
LINC00428-201ENST00000415620 TP53I13Q8NBR0 393 aaPredicted RBP4.34□□□□□ -1.71
LINC00428-201ENST00000415620 ENOX1Q8TC92 643 aaKnown RBP4.34□□□□□ -1.71
LINC00428-201ENST00000415620 SYTL5Q8TDW5 730 aaPredicted RBP4.34□□□□□ -1.71
LINC00428-201ENST00000415620 MAP6Q96JE9 813 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms