RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 RNF41Q9H4P4 317 aaPredicted RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 MCM9Q9NXL9 1143 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 RPS6KL1Q9Y6S9 549 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 USP54Q70EL1 1684 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 A0A087WWV3 80 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 LUC7L3O95232 432 aaKnown RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 CYP21A2P08686 494 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 XBP1P17861 261 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 USP14P54578 494 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 BARGINQ6ZT62 677 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 TOGARAM2Q6ZUX3 1019 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 ZNF444Q8N0Y2 327 aaPredicted RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 ENGASEQ8NFI3 743 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 NOC3LQ8WTT2 800 aaKnown RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 CELF1Q92879 486 aaKnown RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 GPR108Q9NPR9 543 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 AATFQ9NY61 560 aaKnown RBP eCLIP8.72□□□□□ -1.01
SIK3-203ENST00000415541 STX8Q9UNK0 236 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 A0A1W2PQ27 194 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 A0A1W2PQ64 194 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 A0A1W2PQD8 194 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 JAK2O60674 1132 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 BAG3O95817 575 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 SERPINB2P05120 415 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 LDHBP07195 334 aaKnown RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 RXRBP28702 533 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 MCAMP43121 646 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 MAGEA8P43361 318 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 RAB27AP51159 221 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 IFT88Q13099 833 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 PICALMQ13492 652 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 SPTY2D1Q68D10 685 aaPredicted RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 INTS5Q6P9B9 1019 aaKnown RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 MIPOL1Q8TD10 442 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 PAGR1Q9BTK6 254 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 MYL10Q9BUA6 226 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 SLC26A6Q9BXS9 759 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 PUS7LQ9H0K6 701 aaKnown RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 GOLPH3LQ9H4A5 285 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 DENND2AQ9ULE3 1009 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 CRYBG1Q9Y4K1 1723 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 AKR1B15C9JRZ8 316 aaPredicted RBP8.71□□□□□ -1.01
SIK3-203ENST00000415541 E7EWF7 191 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 LDHCP07864 332 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 IARSP41252 1262 aaKnown RBP8.71□□□□□ -1.01
SIK3-203ENST00000415541 SKOR1P84550 965 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 LAMB3Q13751 1172 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 ADALQ6DHV7 355 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 TLDC1Q6P9B6 456 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 ZNF804AQ7Z570 1209 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 ANKRD23Q86SG2 305 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 C3orf20Q8ND61 904 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 CAGE1Q8TC20 777 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 SDR42E1Q8WUS8 393 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 ATRIPQ8WXE1 791 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 DESI2Q9BSY9 194 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 NARFQ9UHQ1 456 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 MAST3O60307 1309 aa8.71□□□□□ -1.01
SIK3-203ENST00000415541 PXDNLA1KZ92 1463 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 ZBTB43O43298 467 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 CAMTA2O94983 1202 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 FERP16591 822 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 WTAPQ15007 396 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 LRRC23Q53EV4 343 aaPredicted RBP8.71□□□□□ -1.02
SIK3-203ENST00000415541 CLEC4GQ6UXB4 293 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 CCDC170Q8IYT3 715 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 EHBP1Q8NDI1 1231 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 P3H4Q92791 437 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 EPN3Q9H201 632 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 M0R2C6 588 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 RTN3O95197 1032 aaPredicted RBP8.71□□□□□ -1.02
SIK3-203ENST00000415541 HMGB2P26583 209 aaKnown RBP8.71□□□□□ -1.02
SIK3-203ENST00000415541 RASGRF1Q13972 1273 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 ZMYM1Q5SVZ6 1142 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 ALS2CLQ60I27 953 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 CDCA2Q69YH5 1023 aaPredicted RBP8.71□□□□□ -1.02
SIK3-203ENST00000415541 OTUD7BQ6GQQ9 843 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 PIK3R5Q8WYR1 880 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 TBC1D31Q96DN5 1066 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 RBM17Q96I25 401 aaKnown RBP8.71□□□□□ -1.02
SIK3-203ENST00000415541 TSC22D3Q99576 134 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 PIH1D3Q9NQM4 214 aaKnown RBP8.71□□□□□ -1.02
SIK3-203ENST00000415541 RGL1Q9NZL6 768 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 DACH1Q9UI36 760 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 GGA1Q9UJY5 639 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 TRPC6Q9Y210 931 aa8.71□□□□□ -1.02
SIK3-203ENST00000415541 HHATQ5VTY9 493 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 ZNF34Q8IZ26 560 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 FUKQ8N0W3 1084 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 FMR1NBQ8N0W7 255 aaPredicted RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 ARFGAP2Q8N6H7 521 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 OR8K1Q8NGG5 319 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 KCNG4Q8TDN1 519 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 RIN2Q8WYP3 895 aaPredicted RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 ALDH8A1Q9H2A2 487 aaPredicted RBP8.7□□□□□ -1.02
SIK3-203ENST00000415541 UTYO14607 1347 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 SPATA31A6Q5VVP1 1343 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 UBN2Q6ZU65 1347 aa8.7□□□□□ -1.02
SIK3-203ENST00000415541 PTPDC1A2A3K4 754 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms