RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 SUSD6Q92537 303 aa7.6□□□□□ -1.19
LMBR1-204ENST00000415428 NKX2-4Q9H2Z4 354 aa7.6□□□□□ -1.19
LMBR1-204ENST00000415428 ABHD16BQ9H3Z7 469 aa7.6□□□□□ -1.19
LMBR1-204ENST00000415428 FBXO40Q9UH90 709 aa7.6□□□□□ -1.19
LMBR1-204ENST00000415428 CHD9Q3L8U1 2897 aa7.6□□□□□ -1.19
LMBR1-204ENST00000415428 BRCA2P51587 3418 aa7.6□□□□□ -1.19
LMBR1-204ENST00000415428 COL6A3P12111 3177 aa7.6□□□□□ -1.19
LMBR1-204ENST00000415428 RB1P06400 928 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 GRB10Q13322 594 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 SMAD4Q13485 552 aaKnown RBP7.59□□□□□ -1.19
LMBR1-204ENST00000415428 DIXDC1Q155Q3 683 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 IQSEC1Q6DN90 963 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 AFAP1L1Q8TED9 768 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 MRPL38Q96DV4 380 aaKnown RBP7.59□□□□□ -1.19
LMBR1-204ENST00000415428 VTA1Q9NP79 307 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 PPP1R9AQ9ULJ8 1098 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 EMSYQ7Z589 1322 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 EPOPA6NHQ4 379 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 FRAT2O75474 233 aaPredicted RBP7.59□□□□□ -1.19
LMBR1-204ENST00000415428 RSPH1Q8WYR4 309 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 NELL1Q92832 810 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 UBE2ZQ9H832 354 aaPredicted RBP7.59□□□□□ -1.19
LMBR1-204ENST00000415428 VCPKMTQ9H867 229 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 RWDD3Q9Y3V2 267 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 HAS3O00219 553 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 ZEB2O60315 1214 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 SUPT20HL2P0C7V6 817 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 PHKA1P46020 1223 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 CCDC96Q2M329 555 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 SPATA5Q8NB90 893 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 FBXW7Q969H0 707 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 PLVAPQ9BX97 442 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 CD320Q9NPF0 282 aa7.59□□□□□ -1.19
LMBR1-204ENST00000415428 ABHD14A-ACY1A0A1B0GW23 586 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 BAG3O95817 575 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 PBX2P40425 430 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 TEX2Q8IWB9 1127 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 CLP1Q92989 425 aaKnown RBP7.58□□□□□ -1.2
LMBR1-204ENST00000415428 TMEM39AQ9NV64 488 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 PRUNE2Q8WUY3 3088 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 GALR2O43603 387 aaPredicted RBP7.58□□□□□ -1.2
LMBR1-204ENST00000415428 MCAMP43121 646 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 GJC2Q5T442 439 aaPredicted RBP7.58□□□□□ -1.2
LMBR1-204ENST00000415428 TAPT1Q6NXT6 567 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 ZNF365Q70YC5 407 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 ALYREFQ86V81 257 aaKnown RBP7.58□□□□□ -1.2
LMBR1-204ENST00000415428 HERC6Q8IVU3 1022 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 NYAP2Q9P242 653 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 DAXXQ9UER7 740 aaPredicted RBP7.58□□□□□ -1.2
LMBR1-204ENST00000415428 FRMPD4Q14CM0 1322 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 FCER1AP12319 257 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 TMEM132BQ14DG7 1078 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 CNKSR3Q6P9H4 555 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 RASGRP4Q8TDF6 673 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 POLR3EQ9NVU0 708 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 RAPGEFL1Q9UHV5 662 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 SQORQ9Y6N5 450 aa7.58□□□□□ -1.2
LMBR1-204ENST00000415428 FSCN2O14926 492 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 RAG1P15918 1043 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 FAM47AQ5JRC9 791 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 BTNL9Q6UXG8 535 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 C16orf86Q6ZW13 317 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 ATP8B4Q8TF62 1192 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 ATP11BQ9Y2G3 1177 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 H3BNC9 293 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 VWA5AO00534 786 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 POTEDQ86YR6 584 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 BAZ2AQ9UIF9 1905 aaKnown RBP7.57□□□□□ -1.2
LMBR1-204ENST00000415428 ADCY6O43306 1168 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 FGRP09769 529 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 FKBP5Q13451 457 aaPredicted RBP7.57□□□□□ -1.2
LMBR1-204ENST00000415428 WDR43Q15061 677 aaKnown RBP eCLIP7.57□□□□□ -1.2
LMBR1-204ENST00000415428 KCNA10Q16322 511 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 SH3RF3Q8TEJ3 882 aaPredicted RBP7.57□□□□□ -1.2
LMBR1-204ENST00000415428 PRDM12Q9H4Q4 367 aa7.57□□□□□ -1.2
LMBR1-204ENST00000415428 MCM3APO60318 1980 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 WDR81Q562E7 1941 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 MKI67P46013 3256 aaKnown RBP7.56□□□□□ -1.2
LMBR1-204ENST00000415428 APAF1O14727 1248 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 ACTN1P12814 892 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 ERCC3P19447 782 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 ZXDAP98168 799 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 P2RX5Q93086 422 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 RPAP3Q9H6T3 665 aaPredicted RBP7.56□□□□□ -1.2
LMBR1-204ENST00000415428 SLC38A10Q9HBR0 1119 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 MAMSTRQ6ZN01 415 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 GJD3Q8N144 294 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 JARID2Q92833 1246 aaPredicted RBP7.56□□□□□ -1.2
LMBR1-204ENST00000415428 STARD7Q9NQZ5 370 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 ZMYM6O95789 1325 aa7.56□□□□□ -1.2
LMBR1-204ENST00000415428 PRR23AA6NEV1 266 aa7.55□□□□□ -1.2
LMBR1-204ENST00000415428 A6NJR5 290 aa7.55□□□□□ -1.2
LMBR1-204ENST00000415428 RPLP2P05387 115 aaKnown RBP7.55□□□□□ -1.2
LMBR1-204ENST00000415428 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
LMBR1-204ENST00000415428 CCDC155Q8N6L0 562 aa7.55□□□□□ -1.2
LMBR1-204ENST00000415428 ZNF689Q96CS4 500 aaPredicted RBP7.55□□□□□ -1.2
LMBR1-204ENST00000415428 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
LMBR1-204ENST00000415428 CDCA3Q99618 268 aaPredicted RBP7.55□□□□□ -1.2
LMBR1-204ENST00000415428 DLL3Q9NYJ7 618 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms