RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 DTX1Q86Y01 620 aa6.22□□□□□ -1.41
PTPRK-210ENST00000415055 SHKBP1Q8TBC3 707 aa6.22□□□□□ -1.41
PTPRK-210ENST00000415055 SLC7A3Q8WY07 619 aa6.22□□□□□ -1.41
PTPRK-210ENST00000415055 FMNL2Q96PY5 1086 aa6.22□□□□□ -1.41
PTPRK-210ENST00000415055 KIF20BQ96Q89 1820 aa6.22□□□□□ -1.41
PTPRK-210ENST00000415055 DLEC1Q9Y238 1755 aa6.21□□□□□ -1.41
PTPRK-210ENST00000415055 MEGF11A6BM72 1044 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 HSPA8P11142 646 aaKnown RBP6.21□□□□□ -1.42
PTPRK-210ENST00000415055 TAL1P17542 331 aaPredicted RBP6.21□□□□□ -1.42
PTPRK-210ENST00000415055 DDR1Q08345 913 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 C19orf57Q0VDD7 668 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 ORC1Q13415 861 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 ENOX2Q16206 610 aaKnown RBP6.21□□□□□ -1.42
PTPRK-210ENST00000415055 NAALADL2Q58DX5 795 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 IFNL2Q8IZJ0 200 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 TTLL6Q8N841 843 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 TMEM102Q8N9M5 508 aaPredicted RBP6.21□□□□□ -1.42
PTPRK-210ENST00000415055 SLC43A3Q8NBI5 491 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 SETDB2Q96T68 719 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 CARD11Q9BXL7 1154 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 DNAJC25Q9H1X3 360 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 PARP2Q9UGN5 583 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 SOX13Q9UN79 622 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 CNTNAP4Q9C0A0 1308 aa6.21□□□□□ -1.42
PTPRK-210ENST00000415055 INSRP06213 1382 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 FLT4P35916 1363 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 FER1L6Q2WGJ9 1857 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 KDM6AO15550 1401 aaPredicted RBP6.2□□□□□ -1.42
PTPRK-210ENST00000415055 GIPC1O14908 333 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 GAS2O43903 313 aaKnown RBP6.2□□□□□ -1.42
PTPRK-210ENST00000415055 ADAMTS4O75173 837 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 TRPA1O75762 1119 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 WNT11O96014 354 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 CRKLP46109 303 aaKnown RBP6.2□□□□□ -1.42
PTPRK-210ENST00000415055 MAP2K1Q02750 393 aaPredicted RBP6.2□□□□□ -1.42
PTPRK-210ENST00000415055 PSMD2Q13200 908 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 C2CD5Q86YS7 1000 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 ZNF622Q969S3 477 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTPRK-210ENST00000415055 HHIPQ96QV1 700 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 DUSP9Q99956 384 aaKnown RBP6.2□□□□□ -1.42
PTPRK-210ENST00000415055 FOXD3Q9UJU5 478 aaPredicted RBP6.2□□□□□ -1.42
PTPRK-210ENST00000415055 ABT1Q9ULW3 272 aaKnown RBP6.2□□□□□ -1.42
PTPRK-210ENST00000415055 SCN4AP35499 1836 aa6.2□□□□□ -1.42
PTPRK-210ENST00000415055 H0YIN7 160 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 POLRMTO00411 1230 aaKnown RBP6.19□□□□□ -1.42
PTPRK-210ENST00000415055 DDNO94850 711 aaPredicted RBP6.19□□□□□ -1.42
PTPRK-210ENST00000415055 PHKG2P15735 406 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 DEFB115Q30KQ5 88 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 LDHDQ86WU2 507 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 TMEM87AQ8NBN3 555 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 BSNDQ8WZ55 320 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 RNF34Q969K3 372 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 NXPE3Q969Y0 559 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 ARMC5Q96C12 935 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 PUS7Q96PZ0 661 aaKnown RBP6.19□□□□□ -1.42
PTPRK-210ENST00000415055 TGIF2Q9GZN2 237 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 CHRDQ9H2X0 955 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 TRPM7Q96QT4 1865 aa6.19□□□□□ -1.42
PTPRK-210ENST00000415055 USP42Q9H9J4 1324 aaKnown RBP6.19□□□□□ -1.42
PTPRK-210ENST00000415055 KDRP35968 1356 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 ZNF831Q5JPB2 1677 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 PNMA6FA0A0J9YX94 578 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 IQCA1LA6NCM1 817 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 WDR64B1ANS9 1081 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 FYB1O15117 783 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 MAP4P27816 1152 aaKnown RBP6.18□□□□□ -1.42
PTPRK-210ENST00000415055 GNA15P30679 374 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 HDLBPQ00341 1268 aaKnown RBP6.18□□□□□ -1.42
PTPRK-210ENST00000415055 GNL2Q13823 731 aaKnown RBP6.18□□□□□ -1.42
PTPRK-210ENST00000415055 IKBKEQ14164 716 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 USPL1Q5W0Q7 1092 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 HGSNATQ68CP4 663 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 GIMAP7Q8NHV1 300 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 SIN3AQ96ST3 1273 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 OSMRQ99650 979 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 RNF19AQ9NV58 838 aa6.18□□□□□ -1.42
PTPRK-210ENST00000415055 WDR33Q9C0J8 1336 aaKnown RBP6.18□□□□□ -1.42
PTPRK-210ENST00000415055 ERVV-2B6SEH9 535 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 SOX1O00570 391 aaPredicted RBP6.17□□□□□ -1.42
PTPRK-210ENST00000415055 NPHP1O15259 732 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 TNFRSF21O75509 655 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 SERPINB2P05120 415 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 HSP90B1P14625 803 aaKnown RBP6.17□□□□□ -1.42
PTPRK-210ENST00000415055 RGS19P49795 217 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 SGO2Q562F6 1265 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 LDLRAD1Q5T700 205 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 VN1R5Q7Z5H4 357 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 C12orf50Q8NA57 414 aaPredicted RBP6.17□□□□□ -1.42
PTPRK-210ENST00000415055 MFSD14AQ96MC6 490 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 ZKSCAN3Q9BRR0 538 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 TMPRSS13Q9BYE2 586 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 KRTAP9-9Q9BYP9 154 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 SLX4Q8IY92 1834 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 PASKQ96RG2 1323 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 ANKRD31Q8N7Z5 1873 aa6.17□□□□□ -1.42
PTPRK-210ENST00000415055 TJP1Q07157 1748 aa6.16□□□□□ -1.42
PTPRK-210ENST00000415055 EIF1AYO14602 144 aaKnown RBP6.16□□□□□ -1.42
PTPRK-210ENST00000415055 PHACTR2O75167 634 aa6.16□□□□□ -1.42
PTPRK-210ENST00000415055 POLR3DP05423 398 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms