RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 PFKFB3Q16875 520 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-203ENST00000414670 CCDC96Q2M329 555 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 SLC35G1Q2M3R5 365 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 PRAMEF18Q5VWM3 479 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 SLFN13Q68D06 897 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 FAM173BQ6P4H8 233 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 SULF1Q8IWU6 871 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 ZNF710Q8N1W2 664 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 TMEM87AQ8NBN3 555 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 GMCL1P1Q8NEA9 526 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 ZC3H15Q8WU90 426 aaKnown RBP7.16□□□□□ -1.26
ITGB1-203ENST00000414670 DCAF4Q8WV16 495 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 RRP36Q96EU6 259 aaKnown RBP7.16□□□□□ -1.26
ITGB1-203ENST00000414670 ZNF341Q9BYN7 854 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 CPVLQ9H3G5 476 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 SH2D4AQ9H788 454 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 ARHGEF10LQ9HCE6 1279 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 GPCPD1Q9NPB8 672 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 VPS54Q9P1Q0 977 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 TMEM63CQ9P1W3 806 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 USP25Q9UHP3 1055 aa7.16□□□□□ -1.26
ITGB1-203ENST00000414670 FRMPD2Q68DX3 1309 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-203ENST00000414670 GOLGB1Q14789 3259 aaKnown RBP7.15□□□□□ -1.26
ITGB1-203ENST00000414670 KIF28PB7ZC32 967 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 NDUFB10O96000 172 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 MMP1P03956 469 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 ECE1P42892 770 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 GNL2Q13823 731 aaKnown RBP7.15□□□□□ -1.26
ITGB1-203ENST00000414670 ATL3Q6DD88 541 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 KCTD1Q719H9 257 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 BRAPQ7Z569 592 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 USP48Q86UV5 1035 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 DIS3L2Q8IYB7 885 aaKnown RBP7.15□□□□□ -1.26
ITGB1-203ENST00000414670 ACER1Q8TDN7 264 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 GMCL1Q96IK5 515 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 ZNF396Q96N95 335 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-203ENST00000414670 UBA5Q9GZZ9 404 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 TAF1DQ9H5J8 278 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-203ENST00000414670 RIOX1Q9H6W3 641 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 VAT1LQ9HCJ6 419 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 GOPCQ9HD26 462 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 SEC63Q9UGP8 760 aaKnown RBP7.15□□□□□ -1.26
ITGB1-203ENST00000414670 ZNF112Q9UJU3 913 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 KCNJ14Q9UNX9 436 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 CNPY2Q9Y2B0 182 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 TMX2Q9Y320 296 aa7.15□□□□□ -1.26
ITGB1-203ENST00000414670 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.15□□□□□ -1.268e-10■□□□□ 8
ITGB1-203ENST00000414670 FOCADQ5VW36 1801 aa7.15□□□□□ -1.27
ITGB1-203ENST00000414670 BTBD18B2RXH4 712 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 ADM5C9JUS6 153 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 FIBPO43427 364 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 BMP3P12645 472 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 VEGFAP15692 232 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 U2AF2P26368 475 aaKnown RBP eCLIP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 CALML3P27482 149 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 INPP5BP32019 993 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 KRT2P35908 639 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 NLRP5P59047 1200 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 MYSM1Q5VVJ2 828 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 WWC2Q6AWC2 1192 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 TTBK2Q6IQ55 1244 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 KRT26Q7Z3Y9 468 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 HEATR3Q7Z4Q2 680 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 CCDC84Q86UT8 332 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 PNMA8AQ86V59 439 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 HOMER1Q86YM7 354 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 SCYL3Q8IZE3 742 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 FAM177A1Q8N128 213 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 KIAA1524Q8TCG1 905 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 SHISA4Q96DD7 197 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 KLRG1Q96E93 195 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 PIGSQ96S52 555 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 WRNIP1Q96S55 665 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 PHF20Q9BVI0 1012 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 SCAND2PQ9GZW5 306 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 FOXP1Q9H334 677 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 VCPKMTQ9H867 229 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 JMJD4Q9H9V9 463 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 GDPD2Q9HCC8 539 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 BRMS1Q9HCU9 246 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 SH3GLB2Q9NR46 395 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 TFIP11Q9UBB9 837 aaKnown RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 CFAP45Q9UL16 551 aa7.14□□□□□ -1.27
ITGB1-203ENST00000414670 MORC2Q9Y6X9 1032 aaPredicted RBP7.14□□□□□ -1.27
ITGB1-203ENST00000414670 MYH1P12882 1939 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 CDK5RAP2Q96SN8 1893 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 PNMA6FA0A0J9YX94 578 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 POTECB2RU33 542 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 TMEM232C9JQI7 657 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 hCG_1984214I3L0E3 225 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 STXBP3O00186 592 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 PPP1R12BO60237 982 aaPredicted RBP7.13□□□□□ -1.27
ITGB1-203ENST00000414670 USP2O75604 605 aaPredicted RBP7.13□□□□□ -1.27
ITGB1-203ENST00000414670 SLC16A2P36021 539 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 EAPPQ56P03 285 aaPredicted RBP7.13□□□□□ -1.27
ITGB1-203ENST00000414670 GALNT17Q6IS24 598 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 BTNL9Q6UXG8 535 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 DLK2Q6UY11 383 aa7.13□□□□□ -1.27
ITGB1-203ENST00000414670 NOSTRINQ8IVI9 506 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms