RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 USP28Q96RU2 1077 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 ELP3Q9H9T3 547 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 V9GY48 417 aaPredicted RBP13□□□□□ -0.33
LINC00330-201ENST00000414562 KIF28PB7ZC32 967 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 TTLL1O95922 423 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 ASNSP08243 561 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 TOP1P11387 765 aaKnown RBP13□□□□□ -0.33
LINC00330-201ENST00000414562 ZNF445P59923 1031 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 MYSM1Q5VVJ2 828 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 BICD2Q8TD16 824 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
LINC00330-201ENST00000414562 RCOR1Q9UKL0 485 aa13□□□□□ -0.33
LINC00330-201ENST00000414562 SYCE3A1L190 88 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 FSD2A1L4K1 749 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
LINC00330-201ENST00000414562 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 GNAQP50148 359 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 TTLL12Q14166 644 aaPredicted RBP12.99□□□□□ -0.33
LINC00330-201ENST00000414562 STK38Q15208 465 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 ZYXQ15942 572 aaKnown RBP12.99□□□□□ -0.33
LINC00330-201ENST00000414562 USP17L2Q6R6M4 530 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 SRBD1Q8N5C6 995 aaKnown RBP12.99□□□□□ -0.33
LINC00330-201ENST00000414562 MAP3K14Q99558 947 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 FTOQ9C0B1 505 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC00330-201ENST00000414562 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 KCNJ14Q9UNX9 436 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 ZHX2Q9Y6X8 837 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 SMCHD1A6NHR9 2005 aa12.99□□□□□ -0.33
LINC00330-201ENST00000414562 hCG_1642624A0A1W2PR95 340 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 MMP1P03956 469 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 FUT2Q10981 343 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 SPP2Q13103 211 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 GRM4Q14833 912 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 SF3A1Q15459 793 aaKnown RBP12.98□□□□□ -0.33
LINC00330-201ENST00000414562 TTBK2Q6IQ55 1244 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 SPICE1Q8N0Z3 855 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
LINC00330-201ENST00000414562 GBA2Q9HCG7 927 aaPredicted RBP12.98□□□□□ -0.33
LINC00330-201ENST00000414562 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 RTEL1Q9NZ71 1219 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 MAD2L2Q9UI95 211 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 TMX2Q9Y320 296 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 AFG3L2Q9Y4W6 797 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 TOMM70O94826 608 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 NDUFB10O96000 172 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 SNHG28P0DPA3 235 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 PDHBP11177 359 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 ME1P48163 572 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
LINC00330-201ENST00000414562 FRMPD2Q68DX3 1309 aaPredicted RBP12.97□□□□□ -0.33
LINC00330-201ENST00000414562 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 F5H6K3 240 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 CYTH3O43739 400 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 LETM1O95202 739 aaPredicted RBP12.97□□□□□ -0.33
LINC00330-201ENST00000414562 U2AF2P26368 475 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00330-201ENST00000414562 IREB2P48200 963 aaKnown RBP12.97□□□□□ -0.33
LINC00330-201ENST00000414562 MRE11P49959 708 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 KLRC3Q07444 240 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 GAS2L3Q86XJ1 694 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
LINC00330-201ENST00000414562 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 WDR18Q9BV38 432 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 CLIC4Q9Y696 253 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 RLFQ13129 1914 aa12.97□□□□□ -0.33
LINC00330-201ENST00000414562 PALM3A6NDB9 673 aaPredicted RBP12.96□□□□□ -0.33
LINC00330-201ENST00000414562 TRIM75PA6NK02 468 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 IRF6O14896 467 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 NF2P35240 595 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 MTMR2Q13614 643 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 MOGSQ13724 837 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 PKN1Q16512 942 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 ANO1Q5XXA6 986 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 LRSAM1Q6UWE0 723 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 KCTD1Q719H9 257 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 ANKRD13AQ8IZ07 590 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 RBM46Q8TBY0 533 aaKnown RBP12.96□□□□□ -0.33
LINC00330-201ENST00000414562 SHISA4Q96DD7 197 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 GRPEL1Q9HAV7 217 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 POLR3EQ9NVU0 708 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.33
LINC00330-201ENST00000414562 BTBD18B2RXH4 712 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 YEATS4O95619 227 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 PARP1P09874 1014 aaKnown RBP12.96□□□□□ -0.34
LINC00330-201ENST00000414562 LIG1P18858 919 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 SLFN13Q68D06 897 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 ARMC9Q7Z3E5 817 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 KCNG4Q8TDN1 519 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 OTUD5Q96G74 571 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 LZTS2Q9BRK4 669 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 UBA5Q9GZZ9 404 aa12.96□□□□□ -0.34
LINC00330-201ENST00000414562 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.34
LINC00330-201ENST00000414562 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
LINC00330-201ENST00000414562 SPTLC2O15270 562 aa12.95□□□□□ -0.34
LINC00330-201ENST00000414562 RRP9O43818 475 aaKnown RBP12.95□□□□□ -0.34
LINC00330-201ENST00000414562 SCG2P13521 617 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms