RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 CNOT7Q9UIV1 285 aaKnown RBP8.35□□□□□ -1.07
LINC00343-201ENST00000414368 SCN4AP35499 1836 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 EGFRP00533 1210 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 UQCRFS1P1P0C7P4 283 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 VEGFAP15692 232 aaPredicted RBP8.34□□□□□ -1.07
LINC00343-201ENST00000414368 NOS2P35228 1153 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 PLA2G4AP47712 749 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 SERPINB4P48594 390 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
LINC00343-201ENST00000414368 TSHZ3Q63HK5 1081 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 PRICKLE2Q7Z3G6 844 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 SPATA5Q8NB90 893 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 DPF2Q92785 391 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 LNPKQ9C0E8 428 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 GPRC5DQ9NZD1 345 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 SEPT3Q9UH03 358 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 HACL1Q9UJ83 578 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 DENND2AQ9ULE3 1009 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 ADAMTSL1Q8N6G6 1762 aa8.34□□□□□ -1.07
LINC00343-201ENST00000414368 RPS12P25398 132 aaKnown RBP8.33□□□□□ -1.08
LINC00343-201ENST00000414368 ITGB7P26010 798 aa8.33□□□□□ -1.08
LINC00343-201ENST00000414368 EPHX2P34913 555 aa8.33□□□□□ -1.08
LINC00343-201ENST00000414368 ZAP70P43403 619 aa8.33□□□□□ -1.08
LINC00343-201ENST00000414368 PHKA2P46019 1235 aa8.33□□□□□ -1.08
LINC00343-201ENST00000414368 TBC1D10BQ4KMP7 808 aaPredicted RBP8.33□□□□□ -1.08
LINC00343-201ENST00000414368 EAPPQ56P03 285 aaPredicted RBP8.33□□□□□ -1.08
LINC00343-201ENST00000414368 AGBL3Q8NEM8 1001 aa8.33□□□□□ -1.08
LINC00343-201ENST00000414368 TRPM4Q8TD43 1214 aa8.33□□□□□ -1.08
LINC00343-201ENST00000414368 GTF3C2Q8WUA4 911 aaPredicted RBP8.33□□□□□ -1.08
LINC00343-201ENST00000414368 AIDAQ96BJ3 306 aa8.33□□□□□ -1.08
LINC00343-201ENST00000414368 TAF1DQ9H5J8 278 aaPredicted RBP8.33□□□□□ -1.08
LINC00343-201ENST00000414368 PCDHAC2Q9Y5I4 1007 aa8.33□□□□□ -1.08
LINC00343-201ENST00000414368 H7C1D1 291 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 EML1O00423 815 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 CYP2E1P05181 493 aaPredicted RBP8.32□□□□□ -1.08
LINC00343-201ENST00000414368 PRDX5P30044 214 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 HIRAP54198 1017 aaPredicted RBP8.32□□□□□ -1.08
LINC00343-201ENST00000414368 ZNF280AP59817 542 aaPredicted RBP8.32□□□□□ -1.08
LINC00343-201ENST00000414368 FKBP1AP62942 108 aaKnown RBP8.32□□□□□ -1.08
LINC00343-201ENST00000414368 NUCB1Q02818 461 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 POU4F2Q12837 409 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 C4orf17Q53FE4 359 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 TMCO4Q5TGY1 634 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 CAPN12Q6ZSI9 719 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 CHD1LQ86WJ1 897 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 WDR66Q8TBY9 1149 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 ZDHHC1Q8WTX9 485 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 EDC3Q96F86 508 aaKnown RBP8.32□□□□□ -1.08
LINC00343-201ENST00000414368 CCDC136Q96JN2 1154 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 ZNF512BQ96KM6 892 aaPredicted RBP8.32□□□□□ -1.08
LINC00343-201ENST00000414368 BOLA2Q9H3K6 86 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 ANTXR1Q9H6X2 564 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 PIH1D3Q9NQM4 214 aaKnown RBP8.32□□□□□ -1.08
LINC00343-201ENST00000414368 ABCF2Q9UG63 623 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 TTF2Q9UNY4 1162 aaKnown RBP8.32□□□□□ -1.08
LINC00343-201ENST00000414368 HCN4Q9Y3Q4 1203 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 MYH2Q9UKX2 1941 aa8.32□□□□□ -1.08
LINC00343-201ENST00000414368 ASTN2O75129 1339 aaPredicted RBP8.31□□□□□ -1.08
LINC00343-201ENST00000414368 AOX1Q06278 1338 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 MYO3BQ8WXR4 1341 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 IQCA1LA6NCM1 817 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 SPATA31C2B4DYI2 1134 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 MAP4K4O95819 1239 aaPredicted RBP8.31□□□□□ -1.08
LINC00343-201ENST00000414368 LDHBP07195 334 aaKnown RBP8.31□□□□□ -1.08
LINC00343-201ENST00000414368 ATP5JP18859 108 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 MX1P20591 662 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 ZNF211Q13398 564 aaPredicted RBP8.31□□□□□ -1.08
LINC00343-201ENST00000414368 NBPF9Q3BBW0 867 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 ALYREFQ86V81 257 aaKnown RBP8.31□□□□□ -1.08
LINC00343-201ENST00000414368 SKAP1Q86WV1 359 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 TBC1D22AQ8WUA7 517 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
LINC00343-201ENST00000414368 SEMA6BQ9H3T3 888 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 MYOZ2Q9NPC6 264 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 ANO2Q9NQ90 1003 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 ADARB2Q9NS39 739 aaKnown RBP8.31□□□□□ -1.08
LINC00343-201ENST00000414368 ECHDC1Q9NTX5 307 aa8.31□□□□□ -1.08
LINC00343-201ENST00000414368 PDS5AQ29RF7 1337 aaKnown RBP8.3□□□□□ -1.08
LINC00343-201ENST00000414368 SALL3Q9BXA9 1300 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 SALL1Q9NSC2 1324 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 H3BRB1 525 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 GOLIM4O00461 696 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 RHOQP17081 205 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 RBM5P52756 815 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00343-201ENST00000414368 PDE1AP54750 535 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 KIF4BQ2VIQ3 1234 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 CFAP100Q494V2 611 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 SH3PXD2AQ5TCZ1 1133 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 C16orf46Q6P387 395 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00343-201ENST00000414368 GLYCTKQ8IVS8 523 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 ALDH16A1Q8IZ83 802 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 ZNF384Q8TF68 577 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 PRMT6Q96LA8 375 aaPredicted RBP8.3□□□□□ -1.08
LINC00343-201ENST00000414368 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
LINC00343-201ENST00000414368 TUT1Q9H6E5 874 aaKnown RBP8.3□□□□□ -1.08
LINC00343-201ENST00000414368 TIMMDC1Q9NPL8 285 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms