RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 CWC22Q9HCG8 908 aaKnown RBP12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 PPP1R9AQ9ULJ8 1098 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 ZBTB43O43298 467 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 ZBED4O75132 1171 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 DDAH1O94760 285 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 GCLCP48506 637 aaPredicted RBP12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 LBX1P52954 281 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 STK3Q13188 491 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 GRM4Q14833 912 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 SYDE2Q5VT97 1194 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 FAM160B2Q86V87 743 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 CPXCR1Q8N123 301 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 STAG2Q8N3U4 1231 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 PRPF38AQ8NAV1 312 aaKnown RBP12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 TBC1D32Q96NH3 1257 aa12.17□□□□□ -0.46
HLA-DMB-257ENST00000414017 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 GPR25O00155 361 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 HSPA8P11142 646 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 CTCFP49711 727 aaPredicted RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 RBM25P49756 843 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 METAP2P50579 478 aaKnown RBP eCLIP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 AK2P54819 239 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 CCT2P78371 535 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 TOB2Q14106 344 aaPredicted RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 GPATCH4Q5T3I0 446 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 APOA5Q6Q788 366 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 C17orf99Q6UX52 265 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 CMTR1Q8N1G2 835 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 GTF3C2Q8WUA4 911 aaPredicted RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 ZNF296Q8WUU4 475 aaPredicted RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 TXNRD2Q9NNW7 524 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 BTBD7Q9P203 1132 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 RBPJLQ9UBG7 517 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 MAD2L2Q9UI95 211 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
HLA-DMB-257ENST00000414017 ADGRA2Q96PE1 1338 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 VWA5AO00534 786 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 FKTNO75072 461 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 CNMDO75829 334 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 CALM1P0DP23 149 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 CALM2P0DP24 149 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 CALM3P0DP25 149 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 TAL1P17542 331 aaPredicted RBP12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 KIF5BP33176 963 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 ERVK-9P63128 1117 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 ERVK-24P63145 666 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 SP3Q02447 781 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 TROAPQ12815 778 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 KIF22Q14807 665 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 RTN1Q16799 776 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 SGMS1Q86VZ5 419 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 NCAPG2Q86XI2 1143 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 HOMER1Q86YM7 354 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 CD99L2Q8TCZ2 262 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
HLA-DMB-257ENST00000414017 PPFIA3O75145 1194 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 PLEKHA8P1O95397 391 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 BCRP11274 1271 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 TMEM132BQ14DG7 1078 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 RABEP1Q15276 862 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 ANKRD1Q15327 319 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 FAM110CQ1W6H9 321 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 Q3C1V9 767 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 SNRNP48Q6IEG0 339 aaKnown RBP12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 LBX2Q6XYB7 198 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 ADGRF4Q8IZF3 695 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 MB21D1Q8N884 522 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 FANCBQ8NB91 859 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 KIF2CQ99661 725 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 ARHGAP39Q9C0H5 1083 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 SPATC1LQ9H0A9 340 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 HOMER2Q9NSB8 354 aa12.14□□□□□ -0.47
HLA-DMB-257ENST00000414017 MYPNQ86TC9 1320 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 PLA2G6O60733 806 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 ALAS1P13196 640 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 STAT3P40763 770 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 PSMC4P43686 418 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 GNAQP50148 359 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 CCNA1P78396 465 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 CDC37Q16543 378 aaPredicted RBP12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 USH1GQ495M9 461 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 POTEHQ6S545 545 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 NBPF11Q86T75 865 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 CFHR5Q9BXR6 569 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 PORCNQ9H237 461 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 EFCC1Q9HA90 598 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
HLA-DMB-257ENST00000414017 NCOA5Q9HCD5 579 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms