RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 CRBNQ96SW2 442 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 KIAA1683Q9H0B3 1180 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 EHD4Q9H223 541 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 RPAP3Q9H6T3 665 aaPredicted RBP10□□□□□ -0.81
UPF3AP1-201ENST00000413731 GPR108Q9NPR9 543 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 PRDM5Q9NQX1 630 aaPredicted RBP10□□□□□ -0.81
UPF3AP1-201ENST00000413731 SERPINB13Q9UIV8 391 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 ATP11BQ9Y2G3 1177 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 IVNS1ABPQ9Y6Y0 642 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 MCM3APO60318 1980 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 VCANP13611 3396 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 TTC28Q96AY4 2481 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 AP1G2O75843 785 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 SHMT1P34896 483 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP14P54578 494 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 SHHQ15465 462 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 ABCB5Q2M3G0 1257 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 TRIM60Q495X7 471 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 HSP90AB4PQ58FF6 505 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 MAGEB6Q8N7X4 407 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 TTC13Q8NBP0 860 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 ZNF512BQ96KM6 892 aaPredicted RBP9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 CDX2Q99626 313 aaPredicted RBP9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 BCL11AQ9H165 835 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 PRKAG2Q9UGJ0 569 aa9.99□□□□□ -0.81
UPF3AP1-201ENST00000413731 GBF1Q92538 1859 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 ADORA2AP29274 412 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 PDE4CQ08493 712 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 SEPT2Q15019 361 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 SNX17Q15036 470 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 CERKLQ49MI3 558 aaPredicted RBP9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 TMCO4Q5TGY1 634 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 GLMNQ92990 594 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 MOV10L1Q9BXT6 1211 aaKnown RBP9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 CCDC8Q9H0W5 538 aaPredicted RBP9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 ANTXR1Q9H6X2 564 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 PDLIM7Q9NR12 457 aa9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 NOP58Q9Y2X3 529 aaKnown RBP9.98□□□□□ -0.81
UPF3AP1-201ENST00000413731 GREB1LQ9C091 1923 aaPredicted RBP9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 SPTBN5Q9NRC6 3674 aaKnown RBP9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 A0A1W2PRG0 241 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 RCCD1A6NED2 376 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 KBTBD13C9JR72 458 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 SPTLC1O15269 473 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 COBLO75128 1261 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 C7P10643 843 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 PLCD1P51178 756 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 FAM47AQ5JRC9 791 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 OLFML2BQ68BL8 750 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 SLC39A5Q6ZMH5 540 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 SH3RF1Q7Z6J0 888 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 AACSQ86V21 672 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 CLEC10AQ8IUN9 316 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 SIRT2Q8IXJ6 389 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 MAFAQ8NHW3 353 aaPredicted RBP9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 MYLIPQ8WY64 445 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 BADQ92934 168 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 EAF2Q96CJ1 260 aaPredicted RBP9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 TANGO6Q9C0B7 1094 aa9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 TTYH1Q9H313 450 aaPredicted RBP9.97□□□□□ -0.81
UPF3AP1-201ENST00000413731 TRIM43BA6NCK2 446 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 SEPT4O43236 478 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 IGSF3O75054 1194 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 CD46P15529 392 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 ERCC3P19447 782 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 GABPAQ06546 454 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 KIAA1755Q5JYT7 1200 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 DPP9Q86TI2 863 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 TTC6Q86TZ1 520 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 CERS3Q8IU89 383 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 SLC44A5Q8NCS7 719 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 RHPN1Q8TCX5 695 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 FERMT2Q96AC1 680 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 TRIM43Q96BQ3 446 aaPredicted RBP9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 KIF1BPQ96EK5 621 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 RIOK1Q9BRS2 568 aaKnown RBP9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 SPATC1LQ9H0A9 340 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 SEMA6BQ9H3T3 888 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 IL1RAPL2Q9NP60 686 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 CABP5Q9NP86 173 aa9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 SUPT16HQ9Y5B9 1047 aaKnown RBP9.96□□□□□ -0.82
UPF3AP1-201ENST00000413731 MYH4Q9Y623 1939 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 POM121CA8CG34 1229 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 MPHOSPH10O00566 681 aaKnown RBP9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 RAB11FIP3O75154 756 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 CYP2D6P10635 497 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 ITGB8P26012 769 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 LRRC41Q15345 812 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 TUSC1Q2TAM9 212 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 PRAMEF19Q5SWL8 479 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 CLASRPQ8N2M8 674 aaKnown RBP9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 ARRDC4Q8NCT1 418 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 SHCBP1Q8NEM2 672 aa9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 LENG1Q96BZ8 264 aaPredicted RBP9.95□□□□□ -0.82
UPF3AP1-201ENST00000413731 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms