RNA–Protein interactions for RNA: ENST00000413718.1

LINC00111-201, long intergenic non-protein coding RNA 111, humanhuman

TSL 3 BASIC

Gene LINC00111, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00111-201ENST00000413718 PBX4Q9BYU1 374 aa11.37□□□□□ -0.59
LINC00111-201ENST00000413718 UPF3AQ9H1J1 476 aaKnown RBP11.37□□□□□ -0.59
LINC00111-201ENST00000413718 ZNF576Q9H609 170 aa11.37□□□□□ -0.59
LINC00111-201ENST00000413718 ARMT1Q9H993 441 aa11.37□□□□□ -0.59
LINC00111-201ENST00000413718 IL1RAPL2Q9NP60 686 aa11.37□□□□□ -0.59
LINC00111-201ENST00000413718 TMEM39AQ9NV64 488 aa11.37□□□□□ -0.59
LINC00111-201ENST00000413718 TNFRSF10AO00220 468 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 GOLIM4O00461 696 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 CTAGE5O15320 804 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 MBD4O95243 580 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 TIMP1P01033 207 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 PBX2P40425 430 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 STAT3P40763 770 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 CDK7P50613 346 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 KCTD2Q14681 263 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 TMEM240Q5SV17 173 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 FAM83BQ5T0W9 1011 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 MFSD5Q6N075 450 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 STARD7Q9NQZ5 370 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 ATP8A2Q9NTI2 1148 aa11.36□□□□□ -0.59
LINC00111-201ENST00000413718 COL9A1P20849 921 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 NKX3-2P78367 333 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 ADGRE1Q14246 886 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 KCNA10Q16322 511 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 AKNAD1Q5T1N1 836 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
LINC00111-201ENST00000413718 FAM126BQ8IXS8 530 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
LINC00111-201ENST00000413718 TEX13BQ9BXU2 312 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 KATNBL1Q9H079 304 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 CNPY2Q9Y2B0 182 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 RIPK3Q9Y572 518 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 ELP1O95163 1332 aa11.35□□□□□ -0.59
LINC00111-201ENST00000413718 GRXCR1A8MXD5 290 aa11.34□□□□□ -0.59
LINC00111-201ENST00000413718 DCDC2CA8MYV0 355 aa11.34□□□□□ -0.59
LINC00111-201ENST00000413718 ATP2A1O14983 1001 aa11.34□□□□□ -0.59
LINC00111-201ENST00000413718 DUSP11O75319 330 aaKnown RBP11.34□□□□□ -0.59
LINC00111-201ENST00000413718 PPIGQ13427 754 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00111-201ENST00000413718 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
LINC00111-201ENST00000413718 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
LINC00111-201ENST00000413718 KANSL2Q9H9L4 492 aa11.34□□□□□ -0.59
LINC00111-201ENST00000413718 ZHX1Q9UKY1 873 aaPredicted RBP11.34□□□□□ -0.59
LINC00111-201ENST00000413718 MROH7Q68CQ1 1323 aa11.34□□□□□ -0.59
LINC00111-201ENST00000413718 MYH7P12883 1935 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 IGKV6D-41A0A0C4DH26 115 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 USP17L12C9JPN9 530 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 USP17L21D6R901 530 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 CD4P01730 458 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 CSF2RAP15509 400 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 GJA9P57773 515 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
LINC00111-201ENST00000413718 CTR9Q6PD62 1173 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 SIRT2Q8IXJ6 389 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 ATXN2LQ8WWM7 1075 aaKnown RBP11.33□□□□□ -0.6
LINC00111-201ENST00000413718 VWCEQ96DN2 955 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 NUP88Q99567 741 aaPredicted RBP11.33□□□□□ -0.6
LINC00111-201ENST00000413718 SLF1Q9BQI6 1058 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 PRDM12Q9H4Q4 367 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 GOPCQ9HD26 462 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 PAG1Q9NWQ8 432 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.33□□□□□ -0.6
LINC00111-201ENST00000413718 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 RAPGEFL1Q9UHV5 662 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 FAM184BQ9ULE4 1060 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 MCM3APO60318 1980 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 ASTN1O14525 1302 aa11.33□□□□□ -0.6
LINC00111-201ENST00000413718 A0A0U1RQG5 324 aaPredicted RBP11.32□□□□□ -0.6
LINC00111-201ENST00000413718 ARVCFO00192 962 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 NDUFB10O96000 172 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 ASGR1P07306 291 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 MS4A1P11836 297 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 RASA1P20936 1047 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 UBE3CQ15386 1083 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 PSRC1Q6PGN9 363 aaPredicted RBP11.32□□□□□ -0.6
LINC00111-201ENST00000413718 SLC43A3Q8NBI5 491 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 ADAMTS19Q8TE59 1207 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 HERVK_113Q902F9 699 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 ASB2Q96Q27 587 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 HAUS7Q99871 368 aa11.32□□□□□ -0.6
LINC00111-201ENST00000413718 CXXC1Q9P0U4 656 aaPredicted RBP11.32□□□□□ -0.6
LINC00111-201ENST00000413718 YBX2Q9Y2T7 364 aaKnown RBP11.32□□□□□ -0.6
LINC00111-201ENST00000413718 MYO9BQ13459 2157 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 PLIN4Q96Q06 1357 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 C6orf222P0C671 652 aaPredicted RBP11.31□□□□□ -0.6
LINC00111-201ENST00000413718 ACRP10323 421 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 ATP5JP18859 108 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 ACVR2BQ13705 512 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 ZNF365Q70YC5 407 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 ARMCX2Q7L311 632 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 CLASRPQ8N2M8 674 aaKnown RBP11.31□□□□□ -0.6
LINC00111-201ENST00000413718 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 GAS2L1Q99501 681 aaPredicted RBP11.31□□□□□ -0.6
LINC00111-201ENST00000413718 PUS7LQ9H0K6 701 aaKnown RBP11.31□□□□□ -0.6
LINC00111-201ENST00000413718 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 NYAP2Q9P242 653 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 ARPP21Q9UBL0 812 aaPredicted RBP11.31□□□□□ -0.6
LINC00111-201ENST00000413718 GBF1Q92538 1859 aa11.31□□□□□ -0.6
LINC00111-201ENST00000413718 UMODL1Q5DID0 1318 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms