RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 PFKFB1P16118 471 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 KLRC3Q07444 240 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 RILPL1Q5EBL4 403 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 CCDC84Q86UT8 332 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 DAGLBQ8NCG7 672 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 MRPS27Q92552 414 aaKnown RBP9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 DPF2Q92785 391 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 RRP36Q96EU6 259 aaKnown RBP9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 NUP88Q99567 741 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 FHDC1Q9C0D6 1143 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 ZMYND12Q9H0C1 365 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 TNMDQ9H2S6 317 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 VEZTQ9HBM0 779 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 TMEM260Q9NX78 707 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 CNOT7Q9UIV1 285 aaKnown RBP9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 GJA3Q9Y6H8 435 aa9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 COL2A1P02458 1487 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P34-201ENST00000413023 GREB1LQ9C091 1923 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 BRCA1P38398 1863 aaKnown RBP9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 FER1L6Q2WGJ9 1857 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 A0A087X0B3 334 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 SMCO2A6NFE2 343 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 PHF20L1A8MW92 1017 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 FOXN1O15353 648 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 XBP1P17861 261 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 ECE1P42892 770 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 HIRAP54198 1017 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 SNAP25P60880 206 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 MDM2Q00987 491 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 TYRO3Q06418 890 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 RASA3Q14644 834 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 MAP3K11Q16584 847 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 ASPRV1Q53RT3 343 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 SLFN13Q68D06 897 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 ARHGAP27Q6ZUM4 889 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 TMEM179Q6ZVK1 233 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 FAM83AQ86UY5 434 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 CSRNP2Q9H175 543 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 SPON1Q9HCB6 807 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 TMOD2Q9NZR1 351 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 HERC5Q9UII4 1024 aaKnown RBP9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 SRPRBQ9Y5M8 271 aaKnown RBP9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 PSME4Q14997 1843 aa9.9□□□□□ -0.82
HMGN1P34-201ENST00000413023 PNMA6FA0A0J9YX94 578 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 TRIM75PA6NK02 468 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 NDUFB10O96000 172 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 TAL1P17542 331 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 RPS12P25398 132 aaKnown RBP9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 LONRF3Q496Y0 759 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 TBC1D10BQ4KMP7 808 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 TTC38Q5R3I4 469 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 DLK2Q6UY11 383 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 CCDC73Q6ZRK6 1079 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 KRI1Q8N9T8 703 aaKnown RBP9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 ZNF579Q8NAF0 562 aaKnown RBP9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 EPSTI1Q96J88 318 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 PPP1R9BQ96SB3 815 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 GLIS2Q9BZE0 524 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 TMEM60Q9H2L4 133 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 BIN2Q9UBW5 565 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 MORC2Q9Y6X9 1032 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 MYH15Q9Y2K3 1946 aa9.89□□□□□ -0.83
HMGN1P34-201ENST00000413023 BAZ2BQ9UIF8 2168 aaKnown RBP9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 YBX3P16989 372 aaKnown RBP eCLIP9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 CALML3P27482 149 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 CAP2P40123 477 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 EPS15P42566 896 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 ATP2C1P98194 919 aaPredicted RBP9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 ICA1Q05084 483 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 PTGDRQ13258 359 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 INF2Q27J81 1249 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 CCDC96Q2M329 555 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 PRAMEF18Q5VWM3 479 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 C11orf57Q6ZUT1 292 aaPredicted RBP9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 ILDR2Q71H61 639 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 DCAF4Q8WV16 495 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 P2RX7Q99572 595 aaKnown RBP9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 SYT17Q9BSW7 474 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 HACL1Q9UJ83 578 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 ZBTB21Q9ULJ3 1066 aa9.88□□□□□ -0.83
HMGN1P34-201ENST00000413023 ESYT2A0FGR8 921 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 MCM7P33993 719 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 NAPAP54920 295 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 QRICH1Q2TAL8 776 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 UVSSAQ2YD98 709 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 ANO6Q4KMQ2 910 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 NBPF12Q5TAG4 269 aaPredicted RBP9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 JAKMIP3Q5VZ66 844 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 GALNT17Q6IS24 598 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 BTNL9Q6UXG8 535 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 KRBA2Q6ZNG9 492 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 GMCL1P1Q8NEA9 526 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 TRPM4Q8TD43 1214 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 GMCL1Q96IK5 515 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 TIGD1Q96MW7 591 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 TRIM34Q9BYJ4 488 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms