RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 STXBP3O00186 592 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 LAD1O00515 517 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 ZNF658Q5TYW1 1059 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 TRIM65Q6PJ69 517 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 PPFIBP1Q86W92 1011 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 CCDC12Q8WUD4 166 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 RWDD2AQ9UIY3 292 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 MTMR7Q9Y216 660 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 BAZ2BQ9UIF8 2168 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 ONECUT3O60422 494 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 STAT6P42226 847 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 SLC35G1Q2M3R5 365 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 MFSD14BQ5SR56 506 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 PANX2Q96RD6 677 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 MTRQ99707 1265 aa12.99□□□□□ -0.33
TRAFD1-202ENST00000412615 TEX33O43247 280 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 RPN1P04843 607 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 PARP1P09874 1014 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 SMARCA1P28370 1054 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 SPAG1Q07617 926 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 MEX3CQ5U5Q3 659 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 IGSF22Q8N9C0 903 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 DISC1Q9NRI5 854 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 CTNND2Q9UQB3 1225 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 FLT1P17948 1338 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 HOXA10P31260 410 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 PBX1P40424 430 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 UBA7P41226 1012 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 INF2Q27J81 1249 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 TBC1D16Q8TBP0 767 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 NAA15Q9BXJ9 866 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 ZMYND12Q9H0C1 365 aa12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAFD1-202ENST00000412615 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 LRRC10BA6NIK2 292 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 MYL1P05976 194 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 GOLGA8HP0CJ92 632 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 PRPHP41219 470 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 PAK1Q13153 545 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 KARSQ15046 597 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 SEPT12Q8IYM1 358 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 ANKRD20A12PQ8NF67 263 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 ZNF397Q8NF99 534 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 RASSF8Q8NHQ8 419 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 CRAMP1Q96RY5 1269 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 SRRTQ9BXP5 876 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 CCSER1Q9C0I3 900 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 GAKO14976 1311 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 GNA11P29992 359 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 CDC25AP30304 524 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 NAPAP54920 295 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 RHBDL3P58872 404 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 SEMA3FQ13275 785 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 KRT25Q7Z3Z0 450 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 RRP36Q96EU6 259 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 POLLQ9UGP5 575 aa12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 LIMA1Q9UHB6 759 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 V9GYY5 206 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-202ENST00000412615 HOMEZQ8IX15 550 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 TMEM60Q9H2L4 133 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 TPM1P09493 284 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 RBL2Q08999 1139 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 ELF2Q15723 593 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 SLC27A3Q5K4L6 730 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 SOGA3Q5TF21 947 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 TOGARAM2Q6ZUX3 1019 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 NELFBQ8WX92 580 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 CCDC51Q96ER9 411 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 AK8Q96MA6 479 aa12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 SEC63Q9UGP8 760 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-202ENST00000412615 SNED1Q8TER0 1413 aa12.96□□□□□ -0.34
TRAFD1-202ENST00000412615 SMCO2A6NFE2 343 aa12.96□□□□□ -0.34
TRAFD1-202ENST00000412615 N4BP3O15049 544 aa12.96□□□□□ -0.34
TRAFD1-202ENST00000412615 CBX1P83916 185 aa12.96□□□□□ -0.34
TRAFD1-202ENST00000412615 KCNB1Q14721 858 aa12.96□□□□□ -0.34
TRAFD1-202ENST00000412615 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.34
TRAFD1-202ENST00000412615 CNGA4Q8IV77 575 aa12.96□□□□□ -0.34
TRAFD1-202ENST00000412615 CEP95Q96GE4 821 aa12.96□□□□□ -0.34
TRAFD1-202ENST00000412615 H7C1D1 291 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 CCDC175P0C221 793 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 NOVP48745 357 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 GNG11P61952 73 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 KRT31Q15323 416 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 NAALADL2Q58DX5 795 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 USP17L2Q6R6M4 530 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 CUEDC2Q9H467 287 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 TRPC5Q9UL62 973 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 MFAP3LO75121 409 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 CASQ1P31415 396 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 PRCPP42785 496 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 CPLX3Q8WVH0 158 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 MAGEF1Q9HAY2 307 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms