RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 MCM3APO60318 1980 aa22.21■■□□□ 1.15
TRIM56-202ENST00000412507 ZBED4O75132 1171 aa22.21■■□□□ 1.15
TRIM56-202ENST00000412507 KDM4AO75164 1064 aa22.21■■□□□ 1.15
TRIM56-202ENST00000412507 TOP1P11387 765 aaKnown RBP22.21■■□□□ 1.15
TRIM56-202ENST00000412507 ADORA2AP29274 412 aa22.21■■□□□ 1.15
TRIM56-202ENST00000412507 GJA8P48165 433 aa22.21■■□□□ 1.15
TRIM56-202ENST00000412507 RCSD1Q6JBY9 416 aa22.21■■□□□ 1.15
TRIM56-202ENST00000412507 KCTD1Q719H9 257 aa22.21■■□□□ 1.15
TRIM56-202ENST00000412507 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.21■■□□□ 1.152e-6■□□□□ 10.1
TRIM56-202ENST00000412507 FLRT1Q9NZU1 646 aa22.21■■□□□ 1.15
TRIM56-202ENST00000412507 CTDP1Q9Y5B0 961 aaPredicted RBP22.21■■□□□ 1.15
TRIM56-202ENST00000412507 B4E1Z4 1266 aa22.2■■□□□ 1.14
TRIM56-202ENST00000412507 STAT2P52630 851 aa22.2■■□□□ 1.14
TRIM56-202ENST00000412507 IKQ13123 557 aaPredicted RBP22.2■■□□□ 1.14
TRIM56-202ENST00000412507 SNRNP48Q6IEG0 339 aaKnown RBP22.2■■□□□ 1.14
TRIM56-202ENST00000412507 DPP9Q86TI2 863 aa22.2■■□□□ 1.14
TRIM56-202ENST00000412507 CPXCR1Q8N123 301 aa22.2■■□□□ 1.14
TRIM56-202ENST00000412507 U2AF1L4Q8WU68 220 aaKnown RBP22.2■■□□□ 1.14
TRIM56-202ENST00000412507 DEFB118Q96PH6 123 aa22.2■■□□□ 1.14
TRIM56-202ENST00000412507 PAK6Q9NQU5 681 aaPredicted RBP22.2■■□□□ 1.14
TRIM56-202ENST00000412507 SGPL1O95470 568 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 HOXC6P09630 235 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 PRKAR2AP13861 404 aaKnown RBP22.19■■□□□ 1.14
TRIM56-202ENST00000412507 SLC4A3P48751 1232 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 CACNB2Q08289 660 aaPredicted RBP22.19■■□□□ 1.14
TRIM56-202ENST00000412507 FAM160B2Q86V87 743 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 CHURC1Q8WUH1 139 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 TTC14Q96N46 770 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 TEX13BQ9BXU2 312 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 SLC38A10Q9HBR0 1119 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 HMX1Q9NP08 348 aaPredicted RBP22.19■■□□□ 1.14
TRIM56-202ENST00000412507 RPTORQ8N122 1335 aa22.19■■□□□ 1.14
TRIM56-202ENST00000412507 MKI67P46013 3256 aaKnown RBP22.18■■□□□ 1.14
TRIM56-202ENST00000412507 COBLO75128 1261 aa22.18■■□□□ 1.14
TRIM56-202ENST00000412507 FCER1AP12319 257 aa22.18■■□□□ 1.14
TRIM56-202ENST00000412507 CCDC96Q2M329 555 aa22.18■■□□□ 1.14
TRIM56-202ENST00000412507 BMP2KLQ5H9B9 411 aa22.18■■□□□ 1.14
TRIM56-202ENST00000412507 MAP3K21Q5TCX8 1036 aa22.18■■□□□ 1.14
TRIM56-202ENST00000412507 ABRAQ8N0Z2 381 aa22.18■■□□□ 1.14
TRIM56-202ENST00000412507 DCAF4Q8WV16 495 aa22.18■■□□□ 1.14
TRIM56-202ENST00000412507 RAVER2Q9HCJ3 691 aaKnown RBP22.18■■□□□ 1.14
TRIM56-202ENST00000412507 COPB2P35606 906 aa22.17■■□□□ 1.14
TRIM56-202ENST00000412507 NT5C2P49902 561 aa22.17■■□□□ 1.14
TRIM56-202ENST00000412507 IQCA1Q86XH1 822 aa22.17■■□□□ 1.14
TRIM56-202ENST00000412507 MMP19Q99542 508 aa22.17■■□□□ 1.14
TRIM56-202ENST00000412507 KRT23Q9C075 422 aa22.17■■□□□ 1.14
TRIM56-202ENST00000412507 ZSWIM5Q9P217 1185 aa22.17■■□□□ 1.14
TRIM56-202ENST00000412507 RIPK3Q9Y572 518 aa22.17■■□□□ 1.14
TRIM56-202ENST00000412507 U3KPZ7 1027 aaPredicted RBP22.17■■□□□ 1.14
TRIM56-202ENST00000412507 ALPK3Q96L96 1907 aa22.16■■□□□ 1.14
TRIM56-202ENST00000412507 ATP2A1O14983 1001 aa22.16■■□□□ 1.14
TRIM56-202ENST00000412507 PLA2G6O60733 806 aa22.16■■□□□ 1.14
TRIM56-202ENST00000412507 TFRCP02786 760 aaKnown RBP22.16■■□□□ 1.14
TRIM56-202ENST00000412507 CYP21A2P08686 494 aa22.16■■□□□ 1.14
TRIM56-202ENST00000412507 MFSD14CQ5VZR4 134 aa22.16■■□□□ 1.14
TRIM56-202ENST00000412507 TTBK2Q6IQ55 1244 aa22.16■■□□□ 1.14
TRIM56-202ENST00000412507 CNNM2Q9H8M5 875 aa22.16■■□□□ 1.14
TRIM56-202ENST00000412507 FRMPD2Q68DX3 1309 aaPredicted RBP22.15■■□□□ 1.14
TRIM56-202ENST00000412507 PGK2P07205 417 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 FDX1P10109 184 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 CCND3P30281 292 aaPredicted RBP22.15■■□□□ 1.14
TRIM56-202ENST00000412507 KCTD2Q14681 263 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 CCDC178Q5BJE1 867 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 DGKHQ86XP1 1220 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 MAP4K1Q92918 833 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 ZSCAN10Q96SZ4 725 aaPredicted RBP22.15■■□□□ 1.14
TRIM56-202ENST00000412507 ESYT1Q9BSJ8 1104 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 GPCPD1Q9NPB8 672 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 SLC5A4Q9NY91 659 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 PRR12Q9ULL5 1215 aa22.15■■□□□ 1.14
TRIM56-202ENST00000412507 LCTP09848 1927 aa22.14■■□□□ 1.14
TRIM56-202ENST00000412507 PDHBP11177 359 aa22.14■■□□□ 1.13
TRIM56-202ENST00000412507 CYP2C19P33261 490 aa22.14■■□□□ 1.13
TRIM56-202ENST00000412507 OAZ1P54368 228 aa22.14■■□□□ 1.13
TRIM56-202ENST00000412507 SNAP25P60880 206 aa22.14■■□□□ 1.13
TRIM56-202ENST00000412507 CRISPLD2Q9H0B8 497 aa22.14■■□□□ 1.13
TRIM56-202ENST00000412507 TAF6LQ9Y6J9 622 aa22.14■■□□□ 1.13
TRIM56-202ENST00000412507 ZNF536O15090 1300 aa22.13■■□□□ 1.13
TRIM56-202ENST00000412507 TNKSO95271 1327 aa22.13■■□□□ 1.13
TRIM56-202ENST00000412507 IGHA2P01877 340 aa22.13■■□□□ 1.13
TRIM56-202ENST00000412507 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
TRIM56-202ENST00000412507 SLC16A2P36021 539 aa22.13■■□□□ 1.13
TRIM56-202ENST00000412507 OLFML2BQ68BL8 750 aa22.13■■□□□ 1.13
TRIM56-202ENST00000412507 CCDC174Q6PII3 467 aa22.13■■□□□ 1.13
TRIM56-202ENST00000412507 KIAA1211Q6ZU35 1233 aa22.13■■□□□ 1.13
TRIM56-202ENST00000412507 ENAHQ8N8S7 591 aaPredicted RBP22.13■■□□□ 1.13
TRIM56-202ENST00000412507 MAML3Q96JK9 1138 aa22.13■■□□□ 1.13
TRIM56-202ENST00000412507 RBM8AQ9Y5S9 174 aaKnown RBP22.13■■□□□ 1.13
TRIM56-202ENST00000412507 TRDNQ13061 729 aa22.12■■□□□ 1.13
TRIM56-202ENST00000412507 BTNL9Q6UXG8 535 aa22.12■■□□□ 1.13
TRIM56-202ENST00000412507 CYB5R4Q7L1T6 521 aa22.12■■□□□ 1.13
TRIM56-202ENST00000412507 PNMA1Q8ND90 353 aa22.12■■□□□ 1.13
TRIM56-202ENST00000412507 ANKS1AQ92625 1134 aa22.12■■□□□ 1.13
TRIM56-202ENST00000412507 AGBL1Q96MI9 1066 aa22.12■■□□□ 1.13
TRIM56-202ENST00000412507 LSG1Q9H089 658 aaKnown RBP22.12■■□□□ 1.13
TRIM56-202ENST00000412507 KAT14Q9H8E8 782 aa22.12■■□□□ 1.13
TRIM56-202ENST00000412507 BAZ2BQ9UIF8 2168 aaKnown RBP22.11■■□□□ 1.13
TRIM56-202ENST00000412507 CEP290O15078 2479 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 E7EWF7 191 aa22.11■■□□□ 1.13
TRIM56-202ENST00000412507 FARP2O94887 1054 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms