RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 NDUFB10O96000 172 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 NAPAP54920 295 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 SF3A1Q15459 793 aaKnown RBP13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 SLC35G1Q2M3R5 365 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 SUPT20HL1Q3ZLR7 823 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 WWC2Q6AWC2 1192 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 GALNT17Q6IS24 598 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 KCTD1Q719H9 257 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 PIGSQ96S52 555 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 FEZ1Q99689 392 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 CPVLQ9H3G5 476 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 BARHL2Q9NY43 387 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 TMX2Q9Y320 296 aa13.35□□□□□ -0.27
SNRNP35-202ENST00000412157 PHF20L1A8MW92 1017 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 BMP3P12645 472 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 TPRNQ4KMQ1 711 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 RILPL1Q5EBL4 403 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 ANO1Q5XXA6 986 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 USP50Q70EL3 339 aaPredicted RBP13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 SIAH1Q8IUQ4 282 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 ADGRF4Q8IZF3 695 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 BICD2Q8TD16 824 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 GPT2Q8TD30 523 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 RCOR1Q9UKL0 485 aa13.34□□□□□ -0.27
SNRNP35-202ENST00000412157 PAPPA2Q9BXP8 1791 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 PNMA6FA0A0J9YX94 578 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 A0A1W2PRG0 241 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 IQCA1LA6NCM1 817 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 ECE1P42892 770 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 NASPP49321 788 aaPredicted RBP13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 NR5A1Q13285 461 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 TTBK2Q6IQ55 1244 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 CAVIN1Q6NZI2 390 aaKnown RBP13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 BLIDQ8IZY5 108 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 DAGLBQ8NCG7 672 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 ACER1Q8TDN7 264 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 SHISA4Q96DD7 197 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 GZF1Q9H116 711 aaPredicted RBP13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 VCPKMTQ9H867 229 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 C6orf50Q9HD87 102 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 PCDHA4Q9UN74 947 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 CEP131Q9UPN4 1083 aa13.33□□□□□ -0.28
SNRNP35-202ENST00000412157 PARP14Q460N5 1801 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 ESYT2A0FGR8 921 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 ZBTB5O15062 677 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 SPTLC2O15270 562 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 GNA11P29992 359 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 EPHX2P34913 555 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 SLC16A2P36021 539 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 ME1P48163 572 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 ZYXQ15942 572 aaKnown RBP13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 EAPPQ56P03 285 aaPredicted RBP13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 SYDE2Q5VT97 1194 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 LINC00301Q8NCQ3 95 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 WRNIP1Q96S55 665 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 JMJD4Q9H9V9 463 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 PICK1Q9NRD5 415 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 CLIC4Q9Y696 253 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 SSC5DA1L4H1 1573 aa13.32□□□□□ -0.28
SNRNP35-202ENST00000412157 RBBP6Q7Z6E9 1792 aaKnown RBP13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 CCDC194A0A1B0GVG4 234 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 USP17L10C9JJH3 530 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 TMEM232C9JQI7 657 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 FOXN1O15353 648 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 INPP5BP32019 993 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 NF2P35240 595 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 NPY5RQ15761 445 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 SPICE1Q8N0Z3 855 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 MTMR8Q96EF0 704 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 ZMYND12Q9H0C1 365 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 ZNF112Q9UJU3 913 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 PTPRFP10586 1907 aa13.31□□□□□ -0.28
SNRNP35-202ENST00000412157 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 BMP15O95972 392 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 TRAPPC10P48553 1259 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 ADCY7P51828 1080 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 STAT2P52630 851 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 TRAF1Q13077 416 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 SLC39A14Q15043 492 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 QRICH1Q2TAL8 776 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 FAM83BQ5T0W9 1011 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
SNRNP35-202ENST00000412157 BTNL9Q6UXG8 535 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms