RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ERMP1Q7Z2K6 904 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CDH24Q86UP0 819 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 C3orf58Q8NDZ4 430 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PIWIL2Q8TC59 973 aaKnown RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 XAGE3Q8WTP9 111 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 MZB1Q8WU39 189 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 GPRASP2Q96D09 838 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 COX4I2Q96KJ9 171 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 NECAB3Q96P71 396 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 HIRIP3Q9BW71 556 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 DUSP15Q9H1R2 295 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TRIT1Q9H3H1 467 aaKnown RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 FBRSQ9HAH7 460 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 USP40Q9NVE5 1235 aa3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PPP1R1BQ9UD71 204 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 DDX41Q9UJV9 622 aaKnown RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 R3HCC1Q9Y3T6 440 aaKnown RBP3.94□□□□□ -1.78
RNU6-1140P-201ENST00000410517 C1QTNF3-AMACRE9PGA6 284 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 HRKO00198 91 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TRIM37O94972 964 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 LTKP29376 864 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 EIF4A3P38919 411 aaKnown RBP3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 NKG7Q16617 165 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PCNX4Q63HM2 1172 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 METTL16Q86W50 562 aaKnown RBP3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ELMO3Q96BJ8 720 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SEC16BQ96JE7 1060 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 KBTBD4Q9NVX7 518 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PDS5BQ9NTI5 1447 aa3.93□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PRAMEF27A3QJZ7 478 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 U2SURPO15042 1029 aaKnown RBP3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 STK10O94804 968 aaKnown RBP3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SDHBP21912 280 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 DNAJA1P31689 397 aaKnown RBP3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ZNF165P49910 485 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PDE4BQ07343 736 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 DUSP4Q13115 394 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 MPP2Q14168 576 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 AGMOQ6ZNB7 445 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ANKS4BQ8N8V4 417 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 OR6P1Q8NGX9 317 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 GRIN3AQ8TCU5 1115 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 RASGRP4Q8TDF6 673 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CPLX3Q8WVH0 158 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CRBNQ96SW2 442 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 NT5C1AQ9BXI3 368 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 GPATCH2Q9NW75 528 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CACNA2D2Q9NY47 1150 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 EBF1Q9UH73 591 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PCDHA4Q9UN74 947 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 PCDHA11Q9Y5I1 949 aa3.92□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ENC1O14682 589 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 FFAR3O14843 346 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ZNF20P17024 532 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CANXP27824 592 aaKnown RBP3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ACVRL1P37023 503 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 GJA8P48165 433 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 SMARCA2P51531 1590 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 APOBRQ0VD83 1088 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 MAP3K11Q16584 847 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 ZNF394Q53GI3 561 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TNNI3KQ59H18 835 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 NT5DC1Q5TFE4 455 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 NBPF6Q5VWK0 638 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 CKAP2LQ8IYA6 745 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 Q8N1X5 172 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 NKD1Q969G9 470 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 NBPF4Q96M43 638 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TINF2Q9BSI4 451 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 TACC3Q9Y6A5 838 aa3.91□□□□□ -1.78
RNU6-1140P-201ENST00000410517 MINDY4BA8MYZ0 360 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 FBXO24O75426 580 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ITGB3P05106 788 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CELA3AP09093 270 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CHMP4BP1P59074 171 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 RAD51AP2Q09MP3 1159 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PAK2Q13177 524 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 CAMK2GQ13555 558 aaPredicted RBP3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LRRFIP1Q32MZ4 808 aaKnown RBP3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PRAMEF13Q5VWM6 474 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 C9orf131Q5VYM1 1079 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 OLFML2BQ68BL8 750 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 FAM196AQ6ZSG2 479 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 USP51Q70EK9 711 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 HDXQ7Z353 690 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 NLRX1Q86UT6 975 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 TSPYL5Q86VY4 417 aaPredicted RBP3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 IGDCC3Q8IVU1 814 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 GOLM1Q8NBJ4 401 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 PHC3Q8NDX5 983 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ZNF296Q8WUU4 475 aaPredicted RBP3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 GATAD2BQ8WXI9 593 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 DDX1Q92499 740 aaKnown RBP3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 RHOVQ96L33 236 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 Q96M66 194 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 C8orf49Q96NF6 230 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 GMLQ99445 158 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 LRRC3Q9BY71 257 aa3.9□□□□□ -1.79
RNU6-1140P-201ENST00000410517 ACBD3Q9H3P7 528 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms