RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CTNND1O60716 968 aaKnown RBP14.33□□□□□ -0.12
CHMP3-204ENST00000409727 ATP2B1P20020 1258 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 SMARCA1P28370 1054 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 NAPAP54920 295 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 SNAP25P60880 206 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 KLHL40Q2TBA0 621 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 CAVIN1Q6NZI2 390 aaKnown RBP14.33□□□□□ -0.12
CHMP3-204ENST00000409727 HOOK2Q96ED9 719 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 L3MBTL3Q96JM7 780 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-204ENST00000409727 GOPCQ9HD26 462 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 BARHL2Q9NY43 387 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 PPP2R3BQ9Y5P8 575 aa14.33□□□□□ -0.12
CHMP3-204ENST00000409727 GOLGA6L4A6NEF3 574 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 TMEM232C9JQI7 657 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 BMP3P12645 472 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 UBE2HP62256 183 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 NPY5RQ15761 445 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 NOM1Q5C9Z4 860 aaKnown RBP14.32□□□□□ -0.12
CHMP3-204ENST00000409727 KRT26Q7Z3Y9 468 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 GMCL1Q96IK5 515 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 ATAD5Q96QE3 1844 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 PITPNM2Q9BZ72 1349 aa14.32□□□□□ -0.12
CHMP3-204ENST00000409727 STK38Q15208 465 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 EARS2Q5JPH6 523 aaKnown RBP14.31□□□□□ -0.12
CHMP3-204ENST00000409727 FAM83BQ5T0W9 1011 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 RASGRP4Q8TDF6 673 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 COA7Q96BR5 231 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 SH3GLB2Q9NR46 395 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 SSC5DA1L4H1 1573 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 ELP1O95163 1332 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 DGKZQ13574 1117 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 SF3A1Q15459 793 aaKnown RBP14.31□□□□□ -0.12
CHMP3-204ENST00000409727 SUPT20HL1Q3ZLR7 823 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 ANO1Q5XXA6 986 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 USP50Q70EL3 339 aaPredicted RBP14.31□□□□□ -0.12
CHMP3-204ENST00000409727 BLIDQ8IZY5 108 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 CCDC148Q8NFR7 591 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 SH2D4AQ9H788 454 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 RTEL1Q9NZ71 1219 aa14.31□□□□□ -0.12
CHMP3-204ENST00000409727 ZC3H4Q9UPT8 1303 aaKnown RBP14.3□□□□□ -0.12
CHMP3-204ENST00000409727 PNMA6FA0A0J9YX94 578 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 MBD3O95983 291 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 CALML3P27482 149 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 ME1P48163 572 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 PIK3AP1Q6ZUJ8 805 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 SCYL3Q8IZE3 742 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 PGBD1Q96JS3 809 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 VCPKMTQ9H867 229 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 PICK1Q9NRD5 415 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 RCOR1Q9UKL0 485 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 PCDHA4Q9UN74 947 aa14.3□□□□□ -0.12
CHMP3-204ENST00000409727 ZBTB5O15062 677 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 PPP1R11O60927 126 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-204ENST00000409727 TOB1P50616 345 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-204ENST00000409727 CDC37Q16543 378 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-204ENST00000409727 LINC00301Q8NCQ3 95 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 BICD2Q8TD16 824 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 TAF1DQ9H5J8 278 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-204ENST00000409727 POLR3EQ9NVU0 708 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 ZNF112Q9UJU3 913 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 SYNPO2Q9UMS6 1093 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 IQCA1LA6NCM1 817 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 MARCKSP29966 332 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-204ENST00000409727 STAT2P52630 851 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 MTMR2Q13614 643 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 QRICH1Q2TAL8 776 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 SYDE2Q5VT97 1194 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 CCDC12Q8WUD4 166 aaPredicted RBP14.29□□□□□ -0.12
CHMP3-204ENST00000409727 TNFRSF25Q93038 417 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 KLRG1Q96E93 195 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 PCDHB6Q9Y5E3 794 aa14.29□□□□□ -0.12
CHMP3-204ENST00000409727 TRIM75PA6NK02 468 aa14.28□□□□□ -0.12
CHMP3-204ENST00000409727 POTECB2RU33 542 aa14.28□□□□□ -0.12
CHMP3-204ENST00000409727 SPTLC2O15270 562 aa14.28□□□□□ -0.12
CHMP3-204ENST00000409727 PTPRAP18433 802 aa14.28□□□□□ -0.12
CHMP3-204ENST00000409727 NASPP49321 788 aaPredicted RBP14.28□□□□□ -0.12
CHMP3-204ENST00000409727 SPP2Q13103 211 aa14.28□□□□□ -0.12
CHMP3-204ENST00000409727 RILPL1Q5EBL4 403 aa14.28□□□□□ -0.12
CHMP3-204ENST00000409727 KIFC2Q96AC6 838 aa14.28□□□□□ -0.12
CHMP3-204ENST00000409727 CLEC11AQ9Y240 323 aa14.28□□□□□ -0.12
CHMP3-204ENST00000409727 DOCK1Q14185 1865 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 USP2O75604 605 aaPredicted RBP14.27□□□□□ -0.12
CHMP3-204ENST00000409727 YEATS4O95619 227 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 TAL1P17542 331 aaPredicted RBP14.27□□□□□ -0.12
CHMP3-204ENST00000409727 MTMR8Q96EF0 704 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 ZMYND12Q9H0C1 365 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 C6orf50Q9HD87 102 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 TMEM63CQ9P1W3 806 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 PRR12Q9ULL5 1215 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 PCDHA7Q9UN72 937 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 PCDHA6Q9UN73 950 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 PCDHA8Q9Y5H6 950 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 ZHX2Q9Y6X8 837 aa14.27□□□□□ -0.12
CHMP3-204ENST00000409727 CCDC194A0A1B0GVG4 234 aa14.27□□□□□ -0.13
CHMP3-204ENST00000409727 POTEIP0CG38 1075 aa14.27□□□□□ -0.13
CHMP3-204ENST00000409727 POTEJP0CG39 1038 aa14.27□□□□□ -0.13
CHMP3-204ENST00000409727 GNA11P29992 359 aa14.27□□□□□ -0.13
CHMP3-204ENST00000409727 USH1GQ495M9 461 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms