RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 TFDP1Q14186 410 aa11.32□□□□□ -0.6
POLR1A-203ENST00000409681 IFI16Q16666 785 aaKnown RBP11.32□□□□□ -0.6
POLR1A-203ENST00000409681 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
POLR1A-203ENST00000409681 NSUN4Q96CB9 384 aaKnown RBP11.32□□□□□ -0.6
POLR1A-203ENST00000409681 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 OR52Z1P0C646 297 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 ENOX2Q16206 610 aaKnown RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 MIS18BP1Q6P0N0 1132 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 METTL13Q8N6R0 699 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 MFSD14CQ5VZR4 134 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 GPKOWQ92917 476 aaPredicted RBP eCLIP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 ADPGKQ9BRR6 497 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 OSBPL5Q9H0X9 879 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 TRPC3Q13507 836 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 UTP14CQ5TAP6 766 aaKnown RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 ISM2Q6H9L7 571 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 ZFYVE28Q9HCC9 887 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 PPP2R3BQ9Y5P8 575 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 SIGLEC1Q9BZZ2 1709 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 NWD1Q149M9 1564 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 HARSP12081 509 aaKnown RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 SPOUT1Q5T280 376 aaKnown RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 MYCT1Q8N699 235 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 SLC17A8Q8NDX2 589 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 BIRC3Q13489 604 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 SEPT2Q15019 361 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 ME3Q16798 604 aa11.31□□□□□ -0.6
POLR1A-203ENST00000409681 GIMAP8Q8ND71 665 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 TTC12Q9H892 705 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-203ENST00000409681 INF2Q27J81 1249 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 PRPF38AQ8NAV1 312 aaKnown RBP11.3□□□□□ -0.6
POLR1A-203ENST00000409681 PIGSQ96S52 555 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 ZBTB12Q9Y330 459 aaPredicted RBP11.3□□□□□ -0.6
POLR1A-203ENST00000409681 CYP2D7A0A087X1C5 515 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 STX10O60499 249 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 SLC16A2P36021 539 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 HUNKP57058 714 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 UVSSAQ2YD98 709 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 XKR9Q5GH70 373 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 ZSWIM5Q9P217 1185 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 ABCB11O95342 1321 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 EPHX2P34913 555 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 RCAN1P53805 252 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 SNX16P57768 344 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 PPP2R5AQ15172 486 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
POLR1A-203ENST00000409681 LPAR1Q92633 364 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 CETPP11597 493 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 TAF1CQ15572 869 aaPredicted RBP11.3□□□□□ -0.6
POLR1A-203ENST00000409681 ODR4Q5SWX8 454 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 FMN2Q9NZ56 1722 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 CAMTA1Q9Y6Y1 1673 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 KIF2AO00139 706 aaPredicted RBP11.3□□□□□ -0.6
POLR1A-203ENST00000409681 CETN3O15182 167 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
POLR1A-203ENST00000409681 ELP3Q9H9T3 547 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 MYO5BQ9ULV0 1848 aa11.3□□□□□ -0.6
POLR1A-203ENST00000409681 TRAF5O00463 557 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
POLR1A-203ENST00000409681 ABCD1P33897 745 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 FAM83BQ5T0W9 1011 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 SEPT14Q6ZU15 432 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 ZNF577Q9BSK1 485 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 AP3B2Q13367 1082 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 CCDC117Q8IWD4 279 aaPredicted RBP11.29□□□□□ -0.6
POLR1A-203ENST00000409681 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
POLR1A-203ENST00000409681 LRCH2Q5VUJ6 765 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 ORC4O43929 436 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 JAK2O60674 1132 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 SEC24BO95487 1268 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 IFNAR1P17181 557 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
POLR1A-203ENST00000409681 ALS2CR12Q96Q35 445 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 PLVAPQ9BX97 442 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
POLR1A-203ENST00000409681 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 CPLX3Q8WVH0 158 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 FCER1AP12319 257 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
POLR1A-203ENST00000409681 PPP1R18Q6NYC8 613 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 CTR9Q6PD62 1173 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 FOXP1Q9H334 677 aaPredicted RBP11.29□□□□□ -0.6
POLR1A-203ENST00000409681 KCNH4Q9UQ05 1017 aa11.29□□□□□ -0.6
POLR1A-203ENST00000409681 GOLGA5Q8TBA6 731 aa11.28□□□□□ -0.6
POLR1A-203ENST00000409681 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
POLR1A-203ENST00000409681 LARSQ9P2J5 1176 aaKnown RBP11.28□□□□□ -0.6
POLR1A-203ENST00000409681 KIF5CO60282 957 aa11.28□□□□□ -0.6
POLR1A-203ENST00000409681 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
POLR1A-203ENST00000409681 CYP2D6P10635 497 aa11.28□□□□□ -0.6
POLR1A-203ENST00000409681 CTNNA2P26232 953 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms