RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CFHR5Q9BXR6 569 aa19.36■□□□□ 0.69
SUMO1-208ENST00000409627 HOXC10Q9NYD6 342 aa19.36■□□□□ 0.69
SUMO1-208ENST00000409627 ADGRA2Q96PE1 1338 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 KLRF2D3W0D1 207 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 CA12O43570 354 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 CYP2C8P10632 490 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 MCM2P49736 904 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 IKQ13123 557 aaPredicted RBP19.35■□□□□ 0.69
SUMO1-208ENST00000409627 CCDC144CPQ8IYA2 1237 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 P2RX7Q99572 595 aaKnown RBP19.35■□□□□ 0.69
SUMO1-208ENST00000409627 LZTS2Q9BRK4 669 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 ADAMTS5Q9UNA0 930 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 LIMCH1Q9UPQ0 1083 aa19.35■□□□□ 0.69
SUMO1-208ENST00000409627 MYH6P13533 1939 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 CCDC196A0A1B0GTZ2 297 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 PFKFB2O60825 505 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 FDX1P10109 184 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 SMARCA1P28370 1054 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 SLC16A2P36021 539 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 SYDE2Q5VT97 1194 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 TMTC3Q6ZXV5 915 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 NOL8Q76FK4 1167 aaKnown RBP19.34■□□□□ 0.69
SUMO1-208ENST00000409627 SMCR8Q8TEV9 937 aaPredicted RBP19.34■□□□□ 0.69
SUMO1-208ENST00000409627 KIFC2Q96AC6 838 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 ATG4CQ96DT6 458 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 ZFYVE28Q9HCC9 887 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 FAM217BQ9NTX9 383 aaPredicted RBP19.34■□□□□ 0.69
SUMO1-208ENST00000409627 RNF186Q9NXI6 227 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 SAGE1Q9NXZ1 904 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 PRR12Q9ULL5 1215 aa19.34■□□□□ 0.69
SUMO1-208ENST00000409627 CDC27P30260 824 aa19.33■□□□□ 0.68
SUMO1-208ENST00000409627 GCLCP48506 637 aaPredicted RBP19.33■□□□□ 0.68
SUMO1-208ENST00000409627 CRHR2Q13324 411 aa19.33■□□□□ 0.68
SUMO1-208ENST00000409627 ME3Q16798 604 aa19.33■□□□□ 0.68
SUMO1-208ENST00000409627 MB21D1Q8N884 522 aa19.33■□□□□ 0.68
SUMO1-208ENST00000409627 JMYQ8N9B5 988 aa19.33■□□□□ 0.68
SUMO1-208ENST00000409627 ZSCAN31Q96LW9 406 aaPredicted RBP19.33■□□□□ 0.68
SUMO1-208ENST00000409627 SPZ1Q9BXG8 430 aa19.33■□□□□ 0.68
SUMO1-208ENST00000409627 UBA5Q9GZZ9 404 aa19.33■□□□□ 0.68
SUMO1-208ENST00000409627 SLKQ9H2G2 1235 aaPredicted RBP19.33■□□□□ 0.68
SUMO1-208ENST00000409627 VWA5AO00534 786 aa19.32■□□□□ 0.68
SUMO1-208ENST00000409627 TLR2O60603 784 aa19.32■□□□□ 0.68
SUMO1-208ENST00000409627 PLEKHA8P1O95397 391 aa19.32■□□□□ 0.68
SUMO1-208ENST00000409627 CD2BP2O95400 341 aaKnown RBP19.32■□□□□ 0.68
SUMO1-208ENST00000409627 LARGE1O95461 756 aa19.32■□□□□ 0.68
SUMO1-208ENST00000409627 STK3Q13188 491 aa19.32■□□□□ 0.68
SUMO1-208ENST00000409627 ADGRF4Q8IZF3 695 aa19.32■□□□□ 0.68
SUMO1-208ENST00000409627 RANBP17Q9H2T7 1088 aaKnown RBP19.32■□□□□ 0.68
SUMO1-208ENST00000409627 CPVLQ9H3G5 476 aa19.32■□□□□ 0.68
SUMO1-208ENST00000409627 RIOX1Q9H6W3 641 aa19.32■□□□□ 0.68
SUMO1-208ENST00000409627 CYTH3O43739 400 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 ADD1P35611 737 aaKnown RBP19.31■□□□□ 0.68
SUMO1-208ENST00000409627 CCT2P78371 535 aaKnown RBP19.31■□□□□ 0.68
SUMO1-208ENST00000409627 SCRN1Q12765 414 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 SLC35G1Q2M3R5 365 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 POTEEQ6S8J3 1075 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 SAMD1Q6SPF0 538 aaPredicted RBP19.31■□□□□ 0.68
SUMO1-208ENST00000409627 NBPF11Q86T75 865 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 SRBD1Q8N5C6 995 aaKnown RBP19.31■□□□□ 0.68
SUMO1-208ENST00000409627 REPS2Q8NFH8 660 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 GTF3C6Q969F1 213 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 SLC38A10Q9HBR0 1119 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 NCOA5Q9HCD5 579 aaKnown RBP19.31■□□□□ 0.68
SUMO1-208ENST00000409627 SH2B1Q9NRF2 756 aaPredicted RBP19.31■□□□□ 0.68
SUMO1-208ENST00000409627 WBP1LQ9NX94 342 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 RABGAP1Q9Y3P9 1069 aa19.31■□□□□ 0.68
SUMO1-208ENST00000409627 ZBED4O75132 1171 aa19.3■□□□□ 0.68
SUMO1-208ENST00000409627 TRPA1O75762 1119 aa19.3■□□□□ 0.68
SUMO1-208ENST00000409627 FUT2Q10981 343 aa19.3■□□□□ 0.68
SUMO1-208ENST00000409627 MTMR8Q96EF0 704 aa19.3■□□□□ 0.68
SUMO1-208ENST00000409627 BEGAINQ9BUH8 593 aa19.3■□□□□ 0.68
SUMO1-208ENST00000409627 JMJD4Q9H9V9 463 aa19.3■□□□□ 0.68
SUMO1-208ENST00000409627 RBPJLQ9UBG7 517 aa19.3■□□□□ 0.68
SUMO1-208ENST00000409627 MORF4L1Q9UBU8 362 aa19.3■□□□□ 0.68
SUMO1-208ENST00000409627 CNTNAP5Q8WYK1 1306 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 ATP2A1O14983 1001 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 DHX16O60231 1041 aaKnown RBP19.29■□□□□ 0.68
SUMO1-208ENST00000409627 CNMDO75829 334 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 BCRP11274 1271 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 OAZ1P54368 228 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 NTRK3Q16288 839 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 FAM110CQ1W6H9 321 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 C17orf99Q6UX52 265 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 CMTR1Q8N1G2 835 aaKnown RBP19.29■□□□□ 0.68
SUMO1-208ENST00000409627 SNX21Q969T3 373 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 TXNRD2Q9NNW7 524 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 BTBD7Q9P203 1132 aa19.29■□□□□ 0.68
SUMO1-208ENST00000409627 CTDP1Q9Y5B0 961 aaPredicted RBP19.29■□□□□ 0.68
SUMO1-208ENST00000409627 BAZ2BQ9UIF8 2168 aaKnown RBP19.29■□□□□ 0.68
SUMO1-208ENST00000409627 TBC1D8O95759 1140 aa19.28■□□□□ 0.68
SUMO1-208ENST00000409627 IFNAR1P17181 557 aa19.28■□□□□ 0.68
SUMO1-208ENST00000409627 TMEM132BQ14DG7 1078 aa19.28■□□□□ 0.68
SUMO1-208ENST00000409627 CDC37Q16543 378 aaPredicted RBP19.28■□□□□ 0.68
SUMO1-208ENST00000409627 CPLX2Q6PUV4 134 aaKnown RBP19.28■□□□□ 0.68
SUMO1-208ENST00000409627 ANKRD13CQ8N6S4 541 aa19.28■□□□□ 0.68
SUMO1-208ENST00000409627 PAGR1Q9BTK6 254 aa19.28■□□□□ 0.68
SUMO1-208ENST00000409627 VAT1LQ9HCJ6 419 aa19.28■□□□□ 0.68
SUMO1-208ENST00000409627 CPA4Q9UI42 421 aa19.28■□□□□ 0.68
SUMO1-208ENST00000409627 PNMA2Q9UL42 364 aa19.28■□□□□ 0.68
SUMO1-208ENST00000409627 ZNF214Q9UL59 606 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms