RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 RBL2Q08999 1139 aa18.34■□□□□ 0.53
PTPRN2-205ENST00000409483 TRIML1Q8N9V2 468 aa18.34■□□□□ 0.53
PTPRN2-205ENST00000409483 ARHGEF35A5YM69 484 aa18.33■□□□□ 0.53
PTPRN2-205ENST00000409483 SLFN14P0C7P3 912 aa18.33■□□□□ 0.53
PTPRN2-205ENST00000409483 COPB1P53618 953 aaKnown RBP18.33■□□□□ 0.52
PTPRN2-205ENST00000409483 LY9Q9HBG7 655 aa18.33■□□□□ 0.52
PTPRN2-205ENST00000409483 RIPOR2Q9Y4F9 1068 aa18.33■□□□□ 0.52
PTPRN2-205ENST00000409483 PCDHA1Q9Y5I3 950 aa18.33■□□□□ 0.52
PTPRN2-205ENST00000409483 DLC1Q96QB1 1528 aa18.33■□□□□ 0.52
PTPRN2-205ENST00000409483 GSG1L2A8MUP6 293 aa18.33■□□□□ 0.52
PTPRN2-205ENST00000409483 C8orf74Q6P047 294 aa18.33■□□□□ 0.52
PTPRN2-205ENST00000409483 SORBS3O60504 671 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 FMR1NBQ8N0W7 255 aaPredicted RBP18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 TBCKQ8TEA7 893 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 TMEM232C9JQI7 657 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 BUB1O43683 1085 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 SOWAHDA6NJG2 315 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 CACNB3P54284 484 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 ASIC2Q16515 512 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 ARHGAP44Q17R89 818 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 CERKLQ49MI3 558 aaPredicted RBP18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 GSDMAQ96QA5 445 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 SENP2Q9HC62 589 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 PLCB3Q01970 1234 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 ENAHQ8N8S7 591 aaPredicted RBP18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 SYNCQ9H7C4 482 aa18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 BSDC1Q9NW68 430 aaPredicted RBP18.32■□□□□ 0.52
PTPRN2-205ENST00000409483 PPP1R2P41236 205 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 SF3A3Q12874 501 aaKnown RBP eCLIP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 TBC1D10BQ4KMP7 808 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 CCDC50Q8IVM0 306 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 C1orf167Q5SNV9 1468 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 CLRN2A0PK11 232 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 IKBKBO14920 756 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 EXOC3O60645 756 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 ICA1Q05084 483 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 BIRC3Q13489 604 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 TBC1D9BQ66K14 1250 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 ACRBPQ8NEB7 543 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 NUP58Q9BVL2 599 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 DDX25Q9UHL0 483 aaKnown RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 PCDHA4Q9UN74 947 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 GOLGA6L7A0A1B0GV03 622 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 CEP104O60308 925 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 GDF11O95390 407 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 HPDP32754 393 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 RFX5P48382 616 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 CFAP58Q5T655 872 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 HOOK3Q86VS8 718 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 MYOCDQ8IZQ8 938 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 GTPBP4Q9BZE4 634 aaKnown RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 SRPRBQ9Y5M8 271 aaKnown RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 UBN2Q6ZU65 1347 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 H7C1D1 291 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 LONP1P36776 959 aaKnown RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 CCDC84Q86UT8 332 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 SH3RF3Q8TEJ3 882 aaPredicted RBP18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 LMBR1Q8WVP7 490 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 NOX5Q96PH1 765 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 TNS3Q68CZ2 1445 aa18.31■□□□□ 0.52
PTPRN2-205ENST00000409483 SEC31AO94979 1220 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 KRT5P13647 590 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 OAS2P29728 719 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 CYP2J2P51589 502 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 EXOSC10Q01780 885 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 DLGAP5Q15398 846 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 SLFN13Q68D06 897 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 LSM14BQ9BX40 385 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 USP42Q9H9J4 1324 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 MYZAPP0CAP1 466 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 PAIP2Q9BPZ3 127 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 TUBGCP2Q9BSJ2 902 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 KIAA1024Q9UPX6 916 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 GDAQ9Y2T3 454 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 USP27XA6NNY8 438 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 TSGA10Q9BZW7 698 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 THRAP3Q9Y2W1 955 aaKnown RBP18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 STX10O60499 249 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 CERS3Q8IU89 383 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 SLC35F6Q8N357 371 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 PAGE5Q96GU1 130 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 SAR1BQ9Y6B6 198 aa18.3■□□□□ 0.52
PTPRN2-205ENST00000409483 TNFAIP3P21580 790 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 UBE2SQ16763 222 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 LEMD3Q9Y2U8 911 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 PRPF3O43395 683 aaKnown RBP18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 DESP17661 470 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 ALDH1B1P30837 517 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 DNM2P50570 870 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 SND1Q7KZF4 910 aaKnown RBP eCLIP18.29■□□□□ 0.522e-6■■■■□ 20.8
PTPRN2-205ENST00000409483 UBLCP1Q8WVY7 318 aaPredicted RBP18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 CNOT6LQ96LI5 555 aaKnown RBP18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 OPA1O60313 960 aa18.29■□□□□ 0.52
PTPRN2-205ENST00000409483 DDIT3P35638 169 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms