RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CNGA4Q8IV77 575 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 CEP112Q8N8E3 955 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 L2HGDHQ9H9P8 463 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 TUBE1Q9UJT0 475 aa9.34□□□□□ -0.91
SNX13-201ENST00000409076 FTCDO95954 541 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 LRP10Q7Z4F1 713 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 SRBD1Q8N5C6 995 aaKnown RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 CELF1Q92879 486 aaKnown RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 MS4A14Q96JA4 679 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 UTRNP46939 3433 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 SPATA31D1Q6ZQQ2 1576 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 LRRIQ3A6PVS8 624 aaPredicted RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 ACTN4O43707 911 aaKnown RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 C3orf67Q6ZVT6 689 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 TAX1BP1Q86VP1 789 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 LRRC47Q8N1G4 583 aaKnown RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 ALDH8A1Q9H2A2 487 aaPredicted RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 HYOU1Q9Y4L1 999 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 NKRFO15226 690 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNX13-201ENST00000409076 NFRKBQ6P4R8 1299 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 SLC30A10Q6XR72 485 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 ENOX1Q8TC92 643 aaKnown RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 CCDC47Q96A33 483 aaKnown RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 COA7Q96BR5 231 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 RRP36Q96EU6 259 aaKnown RBP9.33□□□□□ -0.92
SNX13-201ENST00000409076 FUT8Q9BYC5 575 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 TMEM60Q9H2L4 133 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 ACBD3Q9H3P7 528 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 TMEM260Q9NX78 707 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 PKD2L1Q9P0L9 805 aa9.33□□□□□ -0.92
SNX13-201ENST00000409076 AGLP35573 1532 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 TAL1P17542 331 aaPredicted RBP9.32□□□□□ -0.92
SNX13-201ENST00000409076 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 RASSF7Q02833 373 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 CYP26C1Q6V0L0 522 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 MAEAQ7L5Y9 396 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 ISCA1Q9BUE6 129 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 ABHD10Q9NUJ1 306 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 SRPRBQ9Y5M8 271 aaKnown RBP9.32□□□□□ -0.92
SNX13-201ENST00000409076 GOLGA6L9A6NEM1 432 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 ZSCAN5CA6NGD5 496 aaPredicted RBP9.32□□□□□ -0.92
SNX13-201ENST00000409076 FAM196BA6NMK8 535 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 PSMA7O14818 248 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 KIF5AQ12840 1032 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 RAPGEF1Q13905 1077 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 UBE3CQ15386 1083 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 CADPS2Q86UW7 1296 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 ZSCAN29Q8IWY8 852 aaPredicted RBP9.32□□□□□ -0.92
SNX13-201ENST00000409076 AFAP1L1Q8TED9 768 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 RABGGTAQ92696 567 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 LACRTQ9GZZ8 138 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 HPSEQ9Y251 543 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 ARID4AP29374 1257 aaPredicted RBP9.32□□□□□ -0.92
SNX13-201ENST00000409076 SLC16A2P36021 539 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 GGCXP38435 758 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 MNAT1P51948 309 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 RBM5P52756 815 aaKnown RBP eCLIP9.32□□□□□ -0.92
SNX13-201ENST00000409076 KANK3Q6NY19 840 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
SNX13-201ENST00000409076 HDAC7Q8WUI4 952 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 ANKZF1Q9H8Y5 726 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 TCP11L1Q9NUJ3 509 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 SAR1BQ9Y6B6 198 aa9.32□□□□□ -0.92
SNX13-201ENST00000409076 TLDC2A0PJX2 215 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 TMEM110-MUSTN1A8MSY1 372 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 CIAO1O76071 339 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 NDUFA10O95299 355 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 IL17RAQ96F46 866 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 ADGRL3Q9HAR2 1447 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 POTEMA6NI47 508 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 CRKLP46109 303 aaKnown RBP9.31□□□□□ -0.92
SNX13-201ENST00000409076 PDCLQ13371 301 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 NR1I3Q14994 352 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 CCDC93Q567U6 631 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 DCAF17Q5H9S7 520 aaPredicted RBP9.31□□□□□ -0.92
SNX13-201ENST00000409076 TMEM139Q8IV31 216 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 AMOTL1Q8IY63 956 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 SLC4A9Q96Q91 983 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 AGXT2Q9BYV1 514 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 XDHP47989 1333 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 CPDO75976 1380 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 JCADQ9P266 1359 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 TRAF5O00463 557 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 ECM2O94769 699 aaPredicted RBP9.31□□□□□ -0.92
SNX13-201ENST00000409076 CNOT6LQ96LI5 555 aaKnown RBP9.31□□□□□ -0.92
SNX13-201ENST00000409076 TUBGCP2Q9BSJ2 902 aa9.31□□□□□ -0.92
SNX13-201ENST00000409076 FEZ2Q9UHY8 353 aaPredicted RBP9.31□□□□□ -0.92
SNX13-201ENST00000409076 NWD1Q149M9 1564 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 GOLGA6CA6NDK9 693 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 GOLGA6DP0CG33 693 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 MYBL2P10244 700 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 SCG2P13521 617 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 USP8P40818 1118 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 GTF2A1P52655 376 aaPredicted RBP9.3□□□□□ -0.92
SNX13-201ENST00000409076 GNGT1P63211 74 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 UBE2SQ16763 222 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms