RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 EXOC4Q96A65 974 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 TLR7Q9NYK1 1049 aaKnown RBP11.79□□□□□ -0.52
PBRM1-205ENST00000409057 CLASP1Q7Z460 1538 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 ATP7BP35670 1465 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 I3L4J1 428 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 COPB1P53618 953 aaKnown RBP11.79□□□□□ -0.52
PBRM1-205ENST00000409057 SF3A3Q12874 501 aaKnown RBP eCLIP11.79□□□□□ -0.52
PBRM1-205ENST00000409057 TBC1D22AQ8WUA7 517 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 KIF3CO14782 793 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 XRCC5P13010 732 aaKnown RBP11.79□□□□□ -0.52
PBRM1-205ENST00000409057 PPP1R21Q6ZMI0 780 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 BLIDQ8IZY5 108 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 MYCT1Q8N699 235 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 MRPL44Q9H9J2 332 aaKnown RBP11.79□□□□□ -0.52
PBRM1-205ENST00000409057 GCNT3O95395 438 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
PBRM1-205ENST00000409057 ITIH3Q06033 890 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 UBE3CQ15386 1083 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 ZMYM1Q5SVZ6 1142 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 ANKRD42Q8N9B4 389 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 U2AF1L4Q8WU68 220 aaKnown RBP11.79□□□□□ -0.52
PBRM1-205ENST00000409057 SDR42E1Q8WUS8 393 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 P3H4Q92791 437 aa11.79□□□□□ -0.52
PBRM1-205ENST00000409057 ZSCAN10Q96SZ4 725 aaPredicted RBP11.79□□□□□ -0.52
PBRM1-205ENST00000409057 YEATS2Q9ULM3 1422 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 EFCAB13Q8IY85 973 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 RAB3IPQ96QF0 476 aaPredicted RBP11.78□□□□□ -0.52
PBRM1-205ENST00000409057 GPR108Q9NPR9 543 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.527e-7■■■■□ 21.4
PBRM1-205ENST00000409057 STK38LQ9Y2H1 464 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 RPN1P04843 607 aaKnown RBP11.78□□□□□ -0.52
PBRM1-205ENST00000409057 TROVE2P10155 538 aaKnown RBP eCLIP11.78□□□□□ -0.52
PBRM1-205ENST00000409057 GYG1P46976 350 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 CCDC170Q8IYT3 715 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 MGARPQ8TDB4 240 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 KIFC2Q96AC6 838 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 TACO1Q9BSH4 297 aaKnown RBP11.78□□□□□ -0.52
PBRM1-205ENST00000409057 SLAIN2Q9P270 581 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 BCAMP50895 628 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
PBRM1-205ENST00000409057 GMNNO75496 209 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 PDE8BO95263 885 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 HARSP12081 509 aaKnown RBP11.78□□□□□ -0.52
PBRM1-205ENST00000409057 DCUN1D2Q6PH85 259 aa11.78□□□□□ -0.52
PBRM1-205ENST00000409057 DPP8Q6V1X1 898 aaPredicted RBP11.78□□□□□ -0.52
PBRM1-205ENST00000409057 BUB1O43683 1085 aa11.77□□□□□ -0.52
PBRM1-205ENST00000409057 PHLDB3Q6NSJ2 640 aa11.77□□□□□ -0.52
PBRM1-205ENST00000409057 PNMA1Q8ND90 353 aa11.77□□□□□ -0.52
PBRM1-205ENST00000409057 PUS3Q9BZE2 481 aaKnown RBP11.77□□□□□ -0.52
PBRM1-205ENST00000409057 ARMCX3Q9UH62 379 aaPredicted RBP11.77□□□□□ -0.52
PBRM1-205ENST00000409057 KDM3AQ9Y4C1 1321 aa11.77□□□□□ -0.52
PBRM1-205ENST00000409057 UGGT1Q9NYU2 1555 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 H2AFZP0C0S5 128 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 CLCN6P51797 869 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 GUCY2DQ02846 1103 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 H2AFVQ71UI9 128 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 ZNF589Q86UQ0 364 aaPredicted RBP11.77□□□□□ -0.53
PBRM1-205ENST00000409057 MYO5CQ9NQX4 1742 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 CASQ2O14958 399 aaPredicted RBP11.77□□□□□ -0.53
PBRM1-205ENST00000409057 TBC1D8O95759 1140 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 GCKP35557 465 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 PHKA1P46020 1223 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 ZYXQ15942 572 aaKnown RBP11.77□□□□□ -0.53
PBRM1-205ENST00000409057 ARHGAP44Q17R89 818 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 UIMC1Q96RL1 719 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 FAN1Q9Y2M0 1017 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.53
PBRM1-205ENST00000409057 DKC1O60832 514 aaKnown RBP eCLIP11.77□□□□□ -0.53
PBRM1-205ENST00000409057 ADORA1P30542 326 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 LONP1P36776 959 aaKnown RBP11.77□□□□□ -0.53
PBRM1-205ENST00000409057 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
PBRM1-205ENST00000409057 ARHGEF25Q86VW2 580 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 TMEM87AQ8NBN3 555 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 VPS37BQ9H9H4 285 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 USTQ9Y2C2 406 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
PBRM1-205ENST00000409057 SCG2P13521 617 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 RPUSD2Q8IZ73 545 aaKnown RBP11.76□□□□□ -0.53
PBRM1-205ENST00000409057 LINC00301Q8NCQ3 95 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 SYMPKQ92797 1274 aaKnown RBP11.76□□□□□ -0.53
PBRM1-205ENST00000409057 PARD6BQ9BYG5 372 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 GREM2Q9H772 168 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.76□□□□□ -0.53
PBRM1-205ENST00000409057 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 CARMIL3Q8ND23 1372 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 EPHB4P54760 987 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 PTGDRQ13258 359 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 SNCBQ16143 134 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 GALNT17Q6IS24 598 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 TTC16Q8NEE8 873 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 SAMD9LQ8IVG5 1584 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 MED23Q9ULK4 1368 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 MAP3K15Q6ZN16 1313 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 CIAO1O76071 339 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 ABCB4P21439 1286 aa11.76□□□□□ -0.53
PBRM1-205ENST00000409057 EEF1GP26641 437 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms