RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 GLT8D2Q9H1C3 349 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 GDPD2Q9HCC8 539 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 BARHL2Q9NY43 387 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 NOL7Q9UMY1 257 aaKnown RBP11.26□□□□□ -0.61
POLR1A-202ENST00000409024 MYH15Q9Y2K3 1946 aa11.26□□□□□ -0.61
POLR1A-202ENST00000409024 USP17L5A8MUK1 530 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 BTBD18B2RXH4 712 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 KIF28PB7ZC32 967 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 CYTH3O43739 400 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 PLA2G6O60733 806 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 GNA11P29992 359 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 CAP2P40123 477 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 FOSBP53539 338 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 SEPT2Q15019 361 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 STK38Q15208 465 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 CCDC183Q5T5S1 534 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 ADALQ6DHV7 355 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 CAVIN1Q6NZI2 390 aaKnown RBP11.25□□□□□ -0.61
POLR1A-202ENST00000409024 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 USP50Q70EL3 339 aaPredicted RBP11.25□□□□□ -0.61
POLR1A-202ENST00000409024 BICD2Q8TD16 824 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 DDX19AQ9NUU7 478 aaKnown RBP11.25□□□□□ -0.61
POLR1A-202ENST00000409024 VPS54Q9P1Q0 977 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 TMX2Q9Y320 296 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 TCHHQ07283 1943 aa11.25□□□□□ -0.61
POLR1A-202ENST00000409024 PNMA6FA0A0J9YX94 578 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 SPTLC2O15270 562 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 CTNND1O60716 968 aaKnown RBP11.24□□□□□ -0.61
POLR1A-202ENST00000409024 GADD45BO75293 160 aaPredicted RBP11.24□□□□□ -0.61
POLR1A-202ENST00000409024 CELF2O95319 508 aaKnown RBP11.24□□□□□ -0.61
POLR1A-202ENST00000409024 GH2P01242 217 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 EPS15P42566 896 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 SLC1A4P43007 532 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 NOGQ13253 232 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 SF3A1Q15459 793 aaKnown RBP11.24□□□□□ -0.61
POLR1A-202ENST00000409024 SLFN13Q68D06 897 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 MCTP2Q6DN12 878 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 BTNL9Q6UXG8 535 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 SIAH1Q8IUQ4 282 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 BLIDQ8IZY5 108 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 LRRC47Q8N1G4 583 aaKnown RBP11.24□□□□□ -0.61
POLR1A-202ENST00000409024 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 CHAMP1Q96JM3 812 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 TEPSINQ96N21 525 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 ZMYND12Q9H0C1 365 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 GOPCQ9HD26 462 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 ADARB2Q9NS39 739 aaKnown RBP11.24□□□□□ -0.61
POLR1A-202ENST00000409024 GJB4Q9NTQ9 266 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 ZBTB21Q9ULJ3 1066 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 PCDHA4Q9UN74 947 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 KCNJ14Q9UNX9 436 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 MYH6P13533 1939 aa11.24□□□□□ -0.61
POLR1A-202ENST00000409024 F5H6K3 240 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 STXBP3O00186 592 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 KLRC3Q07444 240 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 ORC2Q13416 577 aaPredicted RBP11.23□□□□□ -0.61
POLR1A-202ENST00000409024 NPY5RQ15761 445 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
POLR1A-202ENST00000409024 HABP4Q5JVS0 413 aaKnown RBP11.23□□□□□ -0.61
POLR1A-202ENST00000409024 L1TD1Q5T7N2 865 aaKnown RBP11.23□□□□□ -0.61
POLR1A-202ENST00000409024 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 PGBD1Q96JS3 809 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 ZNF112Q9UJU3 913 aa11.23□□□□□ -0.61
POLR1A-202ENST00000409024 TRIM75PA6NK02 468 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 FAM196BA6NMK8 535 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 PHF20L1A8MW92 1017 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 UBE2Q2LH0YL09 131 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 M0R2N6 131 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 ZBTB5O15062 677 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 CTAGE5O15320 804 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 CUTAO60888 179 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 GDF11O95390 407 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 BMP3P12645 472 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 CMA1P23946 247 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 ME1P48163 572 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 ATP2B2Q01814 1243 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 PTPAQ15257 358 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 SLC35G1Q2M3R5 365 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 ZSCAN23Q3MJ62 389 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 SUPT20HL1Q3ZLR7 823 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 WWC2Q6AWC2 1192 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 ZNF579Q8NAF0 562 aaKnown RBP11.22□□□□□ -0.61
POLR1A-202ENST00000409024 TRPM7Q96QT4 1865 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 ZNF341Q9BYN7 854 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 TMEM63CQ9P1W3 806 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 CLIC4Q9Y696 253 aa11.22□□□□□ -0.61
POLR1A-202ENST00000409024 MYH4Q9Y623 1939 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 FAM237AA0A1B0GTK4 181 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 SHTN1A0MZ66 631 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 FSD2A1L4K1 749 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 NDUFB10O96000 172 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 NAPAP54920 295 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms