RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 STAMQ92783 540 aa14.23□□□□□ -0.13
RNF43-201ENST00000407977 SPTLC3Q9NUV7 552 aa14.23□□□□□ -0.13
RNF43-201ENST00000407977 A2MP01023 1474 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 ATF2P15336 505 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 NDUFA8P51970 172 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 SATB1Q01826 763 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 HADHQ16836 314 aaKnown RBP14.22□□□□□ -0.13
RNF43-201ENST00000407977 SLC35F6Q8N357 371 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 FBXO18Q8NFZ0 1043 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 LRRC59Q96AG4 307 aaKnown RBP14.22□□□□□ -0.13
RNF43-201ENST00000407977 ZNF532Q9HCE3 1301 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 CUL4AQ13619 759 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 HAUS7Q99871 368 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 STAP2Q9UGK3 403 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 RAD51AP2Q09MP3 1159 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 ARHGAP44Q17R89 818 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 BLIDQ8IZY5 108 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 SPATA5Q8NB90 893 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 MIS12Q9H081 205 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 DPH5Q9H2P9 285 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 POLR3EQ9NVU0 708 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 RPN1P04843 607 aaKnown RBP14.22□□□□□ -0.13
RNF43-201ENST00000407977 SLC39A14Q15043 492 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 RNF34Q969K3 372 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 OSBPL3Q9H4L5 887 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 ARPP21Q9UBL0 812 aaPredicted RBP14.22□□□□□ -0.13
RNF43-201ENST00000407977 HARSP12081 509 aaKnown RBP14.22□□□□□ -0.13
RNF43-201ENST00000407977 P4HA1P13674 534 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 HSPA6P17066 643 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 PEX19P40855 299 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
RNF43-201ENST00000407977 RPS6KA2Q15349 733 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 NSMCE1Q8WV22 266 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 FAM89AQ96GI7 184 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 CTDSPL2Q05D32 466 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 ANKRD35Q8N283 1001 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 CCHCR1Q8TD31 782 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 CACTINQ8WUQ7 758 aaKnown RBP14.21□□□□□ -0.13
RNF43-201ENST00000407977 NLRP7Q8WX94 980 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 TBC1D7Q9P0N9 293 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 PRDM1O75626 825 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 PCP11498 1178 aaKnown RBP14.21□□□□□ -0.13
RNF43-201ENST00000407977 CD19P15391 556 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 TRAPPC10P48553 1259 aa14.21□□□□□ -0.13
RNF43-201ENST00000407977 EIF3CLB5ME19 914 aaKnown RBP14.21□□□□□ -0.14
RNF43-201ENST00000407977 SART1O43290 800 aaKnown RBP14.21□□□□□ -0.14
RNF43-201ENST00000407977 BUB1O43683 1085 aa14.21□□□□□ -0.14
RNF43-201ENST00000407977 PKP1Q13835 747 aa14.21□□□□□ -0.14
RNF43-201ENST00000407977 FBXO41Q8TF61 875 aa14.21□□□□□ -0.14
RNF43-201ENST00000407977 EIF3CQ99613 913 aaKnown RBP14.21□□□□□ -0.14
RNF43-201ENST00000407977 PALD1Q9ULE6 856 aa14.21□□□□□ -0.14
RNF43-201ENST00000407977 PFDN1O60925 122 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 IFNB1P01574 187 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 SLC1A4P43007 532 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 ARHGEF18Q6ZSZ5 1173 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 FANCBQ8NB91 859 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 SUDS3Q9H7L9 328 aaPredicted RBP14.2□□□□□ -0.14
RNF43-201ENST00000407977 TXLNGQ9NUQ3 528 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 TPX2Q9ULW0 747 aaKnown RBP14.2□□□□□ -0.14
RNF43-201ENST00000407977 LAD1O00515 517 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 GCP02774 474 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 LMNB1P20700 586 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 ABCB4P21439 1286 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 CASP14P31944 242 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 WHAMMQ8TF30 809 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 DHTKD1Q96HY7 919 aaPredicted RBP14.2□□□□□ -0.14
RNF43-201ENST00000407977 RTCBQ9Y3I0 505 aaKnown RBP14.2□□□□□ -0.14
RNF43-201ENST00000407977 AFG3L2Q9Y4W6 797 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 BIVM-ERCC5R4GMW8 1640 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 MYL1P05976 194 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 OR52Z1P0C646 297 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 KRT3P12035 628 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 ZAP70P43403 619 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 KLHDC4Q8TBB5 520 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 PCDHA5Q9Y5H7 936 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 H0YCG3 227 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 SKIP12755 728 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 EIF3BP55884 814 aaKnown RBP14.2□□□□□ -0.14
RNF43-201ENST00000407977 PTH1RQ03431 593 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 KLHL29Q96CT2 875 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 SCOCQ9UIL1 159 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 WDR7Q9Y4E6 1490 aa14.2□□□□□ -0.14
RNF43-201ENST00000407977 SMCO2A6NFE2 343 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 POLR2FP61218 127 aaKnown RBP14.19□□□□□ -0.14
RNF43-201ENST00000407977 PPARAQ07869 468 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 SLFNL1Q499Z3 407 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 PRR16Q569H4 304 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 GPBP1Q86WP2 473 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.19□□□□□ -0.14
RNF43-201ENST00000407977 SAP30BPQ9UHR5 308 aaKnown RBP14.19□□□□□ -0.14
RNF43-201ENST00000407977 DDB1Q16531 1140 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 RAPGEF6Q8TEU7 1601 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 SEC31AO94979 1220 aaKnown RBP14.19□□□□□ -0.14
RNF43-201ENST00000407977 CLCN6P51797 869 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 AOC3Q16853 763 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 SLFN12Q8IYM2 578 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 DRC3Q9H069 523 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 MAGEA9P43362 315 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 SF3A3Q12874 501 aaKnown RBP eCLIP14.19□□□□□ -0.149e-18■■□□□ 11.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms