RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 OSBPL3Q9H4L5 887 aa22.89■■□□□ 1.25
SMARCB1-204ENST00000407422 IL17RBQ9NRM6 502 aa22.89■■□□□ 1.25
SMARCB1-204ENST00000407422 SLC5A4Q9NY91 659 aa22.89■■□□□ 1.25
SMARCB1-204ENST00000407422 RIPK3Q9Y572 518 aa22.89■■□□□ 1.25
SMARCB1-204ENST00000407422 SMCHD1A6NHR9 2005 aa22.88■■□□□ 1.25
SMARCB1-204ENST00000407422 TSPY2A6NKD2 308 aa22.88■■□□□ 1.25
SMARCB1-204ENST00000407422 HSPD1P10809 573 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-204ENST00000407422 COL6A1P12109 1028 aa22.88■■□□□ 1.25
SMARCB1-204ENST00000407422 PRAMEF19Q5SWL8 479 aa22.88■■□□□ 1.25
SMARCB1-204ENST00000407422 SNRNP48Q6IEG0 339 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-204ENST00000407422 TICAM2Q86XR7 235 aa22.88■■□□□ 1.25
SMARCB1-204ENST00000407422 TEX13BQ9BXU2 312 aa22.88■■□□□ 1.25
SMARCB1-204ENST00000407422 KCTD2Q14681 263 aa22.87■■□□□ 1.25
SMARCB1-204ENST00000407422 C7orf61Q8IZ16 206 aa22.87■■□□□ 1.25
SMARCB1-204ENST00000407422 CPXCR1Q8N123 301 aa22.87■■□□□ 1.25
SMARCB1-204ENST00000407422 RBM27Q9P2N5 1060 aaKnown RBP22.87■■□□□ 1.25
SMARCB1-204ENST00000407422 FEM1BQ9UK73 627 aa22.87■■□□□ 1.25
SMARCB1-204ENST00000407422 STX8Q9UNK0 236 aa22.87■■□□□ 1.25
SMARCB1-204ENST00000407422 RANBP6O60518 1105 aaKnown RBP22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 BMP3P12645 472 aa22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 SDSP20132 328 aa22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 SLC4A3P48751 1232 aa22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 ANO1Q5XXA6 986 aa22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 CCDC171Q6TFL3 1326 aa22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 MSCO60682 206 aa22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 FGRP09769 529 aa22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 IRX6P78412 446 aaPredicted RBP22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 SLC38A10Q9HBR0 1119 aa22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 RAVER2Q9HCJ3 691 aaKnown RBP22.86■■□□□ 1.25
SMARCB1-204ENST00000407422 ORC4O43929 436 aa22.85■■□□□ 1.25
SMARCB1-204ENST00000407422 ZBED4O75132 1171 aa22.85■■□□□ 1.25
SMARCB1-204ENST00000407422 COPB2P35606 906 aa22.85■■□□□ 1.25
SMARCB1-204ENST00000407422 FXR1P51114 621 aaKnown RBP eCLIP22.85■■□□□ 1.25
SMARCB1-204ENST00000407422 ZNF792Q3KQV3 632 aa22.85■■□□□ 1.25
SMARCB1-204ENST00000407422 PRO3102Q9H379 93 aa22.85■■□□□ 1.25
SMARCB1-204ENST00000407422 ISY1Q9ULR0 285 aaKnown RBP22.85■■□□□ 1.25
SMARCB1-204ENST00000407422 TMEM232C9JQI7 657 aa22.84■■□□□ 1.25
SMARCB1-204ENST00000407422 ATP2A1O14983 1001 aa22.84■■□□□ 1.25
SMARCB1-204ENST00000407422 MCCP23508 829 aa22.84■■□□□ 1.25
SMARCB1-204ENST00000407422 HAND2P61296 217 aa22.84■■□□□ 1.25
SMARCB1-204ENST00000407422 RASGRP2Q7LDG7 609 aa22.84■■□□□ 1.25
SMARCB1-204ENST00000407422 SEPT4O43236 478 aa22.83■■□□□ 1.25
SMARCB1-204ENST00000407422 SLC1A4P43007 532 aa22.83■■□□□ 1.25
SMARCB1-204ENST00000407422 RRP12Q5JTH9 1297 aaKnown RBP22.83■■□□□ 1.25
SMARCB1-204ENST00000407422 GMCL1Q96IK5 515 aa22.83■■□□□ 1.25
SMARCB1-204ENST00000407422 TOMM22Q9NS69 142 aa22.83■■□□□ 1.25
SMARCB1-204ENST00000407422 ZMYND8Q9ULU4 1186 aaPredicted RBP22.83■■□□□ 1.25
SMARCB1-204ENST00000407422 CTDP1Q9Y5B0 961 aaPredicted RBP22.83■■□□□ 1.25
SMARCB1-204ENST00000407422 ZMYM6O95789 1325 aa22.83■■□□□ 1.25
SMARCB1-204ENST00000407422 LRRC26Q2I0M4 334 aa22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 TINF2Q9BSI4 451 aa22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 PCDH10Q9P2E7 1040 aa22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 NOVP48745 357 aa22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 STAT2P52630 851 aa22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 PPP4R3BQ5MIZ7 849 aa22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 CWC27Q6UX04 472 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 KCTD1Q719H9 257 aa22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 SENP6Q9GZR1 1112 aaPredicted RBP22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 MTMR7Q9Y216 660 aa22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 DIS3Q9Y2L1 958 aaKnown RBP22.82■■□□□ 1.24
SMARCB1-204ENST00000407422 TAL1P17542 331 aaPredicted RBP22.81■■□□□ 1.24
SMARCB1-204ENST00000407422 SYN1P17600 705 aa22.81■■□□□ 1.24
SMARCB1-204ENST00000407422 GJC2Q5T442 439 aaPredicted RBP22.81■■□□□ 1.24
SMARCB1-204ENST00000407422 DNM1LO00429 736 aa22.8■■□□□ 1.24
SMARCB1-204ENST00000407422 IKQ13123 557 aaPredicted RBP22.8■■□□□ 1.24
SMARCB1-204ENST00000407422 TBC1D10CQ8IV04 446 aa22.8■■□□□ 1.24
SMARCB1-204ENST00000407422 STAG1Q8WVM7 1258 aa22.8■■□□□ 1.24
SMARCB1-204ENST00000407422 DDX11Q96FC9 970 aa22.8■■□□□ 1.24
SMARCB1-204ENST00000407422 DIAPH3Q9NSV4 1193 aa22.8■■□□□ 1.24
SMARCB1-204ENST00000407422 MCM3APO60318 1980 aa22.8■■□□□ 1.24
SMARCB1-204ENST00000407422 DNAJC25-GNG10A0A024R161 153 aa22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 PDE4AP27815 886 aa22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 OAZ1P54368 228 aa22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 RCSD1Q6JBY9 416 aa22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 CHURC1Q8WUH1 139 aa22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 MYCNP04198 464 aaPredicted RBP22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 MFAP1P55081 439 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 SNAP25P60880 206 aa22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 FAM160B2Q86V87 743 aa22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 HOMER2Q9NSB8 354 aa22.79■■□□□ 1.24
SMARCB1-204ENST00000407422 ZNF536O15090 1300 aa22.78■■□□□ 1.24
SMARCB1-204ENST00000407422 ATN1P54259 1190 aaPredicted RBP22.78■■□□□ 1.24
SMARCB1-204ENST00000407422 AKNAD1Q5T1N1 836 aa22.78■■□□□ 1.24
SMARCB1-204ENST00000407422 ARRDC4Q8NCT1 418 aa22.78■■□□□ 1.24
SMARCB1-204ENST00000407422 AGBL1Q96MI9 1066 aa22.78■■□□□ 1.24
SMARCB1-204ENST00000407422 TMEM47Q9BQJ4 181 aa22.78■■□□□ 1.24
SMARCB1-204ENST00000407422 NRBP1Q9UHY1 535 aa22.78■■□□□ 1.24
SMARCB1-204ENST00000407422 LAMA4Q16363 1823 aa22.78■■□□□ 1.24
SMARCB1-204ENST00000407422 LAMA2P24043 3122 aaKnown RBP22.77■■□□□ 1.24
SMARCB1-204ENST00000407422 PLA2G6O60733 806 aa22.77■■□□□ 1.24
SMARCB1-204ENST00000407422 MFSD6Q6ZSS7 791 aa22.77■■□□□ 1.24
SMARCB1-204ENST00000407422 ANKRD35Q8N283 1001 aa22.77■■□□□ 1.24
SMARCB1-204ENST00000407422 CHST13Q8NET6 341 aa22.77■■□□□ 1.24
SMARCB1-204ENST00000407422 TCP11L1Q9NUJ3 509 aa22.77■■□□□ 1.24
SMARCB1-204ENST00000407422 PRR12Q9ULL5 1215 aa22.77■■□□□ 1.24
SMARCB1-204ENST00000407422 ZNF865P0CJ78 1059 aaPredicted RBP22.76■■□□□ 1.23
SMARCB1-204ENST00000407422 FDX1P10109 184 aa22.76■■□□□ 1.23
SMARCB1-204ENST00000407422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.76■■□□□ 1.23
SMARCB1-204ENST00000407422 FGD4Q96M96 766 aa22.76■■□□□ 1.23
SMARCB1-204ENST00000407422 GDF15Q99988 308 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms