RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 TOX2Q96NM4 488 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 ASB2Q96Q27 587 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.5□□□□□ -1.217e-6■■□□□ 11.5
RPA3-204ENST00000406109 RIOK1Q9BRS2 568 aaKnown RBP7.5□□□□□ -1.21
RPA3-204ENST00000406109 PBX4Q9BYU1 374 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 CCDC8Q9H0W5 538 aaPredicted RBP7.5□□□□□ -1.21
RPA3-204ENST00000406109 MROH8Q9H579 483 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 ANTXR1Q9H6X2 564 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 IL1RAPL2Q9NP60 686 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 XPNPEP3Q9NQH7 507 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.5□□□□□ -1.21
RPA3-204ENST00000406109 NRBP1Q9UHY1 535 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 TBX21Q9UL17 535 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 ADAMTS5Q9UNA0 930 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 PCDHB15Q9Y5E8 787 aa7.5□□□□□ -1.21
RPA3-204ENST00000406109 GBF1Q92538 1859 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 ROBO3Q96MS0 1386 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 RAB11FIP3O75154 756 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 TIMP1P01033 207 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 PGK2P07205 417 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 RARBP10826 455 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 RAG1P15918 1043 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 PLA2G5P39877 138 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 IRX6P78412 446 aaPredicted RBP7.49□□□□□ -1.21
RPA3-204ENST00000406109 TMEM132BQ14DG7 1078 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 ZNF792Q3KQV3 632 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 CCDC158Q5M9N0 1113 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 TMEM240Q5SV17 173 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 AKNAD1Q5T1N1 836 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 ZNF467Q7Z7K2 595 aaPredicted RBP7.49□□□□□ -1.21
RPA3-204ENST00000406109 MAGEB6Q8N7X4 407 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 MB21D1Q8N884 522 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 KLHDC9Q8NEP7 349 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 EXOC6Q8TAG9 804 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 RHPN1Q8TCX5 695 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 ATG4CQ96DT6 458 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 KIF1BPQ96EK5 621 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 TINF2Q9BSI4 451 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 TANGO6Q9C0B7 1094 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 TMEM39AQ9NV64 488 aa7.49□□□□□ -1.21
RPA3-204ENST00000406109 DCHS1Q96JQ0 3298 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 MYADML2A6NDP7 307 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 SMIM22K7EJ46 135 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 ADCY6O43306 1168 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 IDH1O75874 414 aaKnown RBP7.48□□□□□ -1.21
RPA3-204ENST00000406109 FCER1AP12319 257 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 USP5P45974 858 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 CDK7P50613 346 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 ACLYP53396 1101 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 MAP3K12Q12852 859 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 PLS1Q14651 629 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 MFSD5Q6N075 450 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 RNF180Q86T96 592 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 TTC6Q86TZ1 520 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 AACSQ86V21 672 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 NCAPG2Q86XI2 1143 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 CLEC10AQ8IUN9 316 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 SPICE1Q8N0Z3 855 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 CLASRPQ8N2M8 674 aaKnown RBP7.48□□□□□ -1.21
RPA3-204ENST00000406109 PDCD7Q8N8D1 485 aaKnown RBP7.48□□□□□ -1.21
RPA3-204ENST00000406109 SLC44A5Q8NCS7 719 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 REPS2Q8NFH8 660 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 ADAMTS19Q8TE59 1207 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 PPM1EQ8WY54 764 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 EAF2Q96CJ1 260 aaPredicted RBP7.48□□□□□ -1.21
RPA3-204ENST00000406109 TSEN34Q9BSV6 310 aaKnown RBP7.48□□□□□ -1.21
RPA3-204ENST00000406109 PRDM12Q9H4Q4 367 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 DCTPP1Q9H773 170 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 CABP5Q9NP86 173 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 SLC5A4Q9NY91 659 aa7.48□□□□□ -1.21
RPA3-204ENST00000406109 NAV1Q8NEY1 1877 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 MYH8P13535 1937 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 BAZ2AQ9UIF9 1905 aaKnown RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 SMARCA5O60264 1052 aaPredicted RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 FLOT1O75955 427 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 SNAI1O95863 264 aaPredicted RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 IFIT2P09913 472 aaKnown RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 CYP2D6P10635 497 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 BMP1P13497 986 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 MRPS5P82675 430 aaKnown RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 CCDC85BQ15834 202 aaPredicted RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 KCNA10Q16322 511 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 CERS3Q8IU89 383 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 RIOX2Q8IUF8 465 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 VWCEQ96DN2 955 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 NECAB3Q96P71 396 aaPredicted RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 UHRF1Q96T88 793 aaPredicted RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 LRRCC1Q9C099 1032 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 FBXO28Q9NVF7 368 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 CXXC1Q9P0U4 656 aaPredicted RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 THEGQ9P2T0 379 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 ZNF214Q9UL59 606 aaPredicted RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 DIS3Q9Y2L1 958 aaKnown RBP7.47□□□□□ -1.21
RPA3-204ENST00000406109 TMX2Q9Y320 296 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 SYNRGQ9UMZ2 1314 aa7.47□□□□□ -1.21
RPA3-204ENST00000406109 FRYLO94915 3013 aa7.46□□□□□ -1.21
RPA3-204ENST00000406109 TCRBV5S4A2TA0A5A2 114 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 DCDC2CA8MYV0 355 aa7.46□□□□□ -1.22
RPA3-204ENST00000406109 MPHOSPH10O00566 681 aaKnown RBP7.46□□□□□ -1.22
RPA3-204ENST00000406109 SNPHO15079 494 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms