RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 ENTPD3O75355 529 aa33.11■■■□□ 2.89
CSNK1E-205ENST00000405675 PNOCQ13519 176 aa33.11■■■□□ 2.89
CSNK1E-205ENST00000405675 HOMER1Q86YM7 354 aa33.11■■■□□ 2.89
CSNK1E-205ENST00000405675 MTMR14Q8NCE2 650 aa33.11■■■□□ 2.89
CSNK1E-205ENST00000405675 SHROOM1Q2M3G4 852 aaPredicted RBP33.11■■■□□ 2.89
CSNK1E-205ENST00000405675 TMOD2Q9NZR1 351 aa33.11■■■□□ 2.89
CSNK1E-205ENST00000405675 PI4KBQ9UBF8 816 aa33.11■■■□□ 2.89
CSNK1E-205ENST00000405675 SNHG28P0DPA3 235 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 SMARCA1P28370 1054 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 TRAPPC10P48553 1259 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 CEP57L1Q8IYX8 460 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 DAGLBQ8NCG7 672 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 CNNM3Q8NE01 707 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 CCDC148Q8NFR7 591 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 PIGSQ96S52 555 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 MYOZ2Q9NPC6 264 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 PCDHA6Q9UN73 950 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 PCDHA8Q9Y5H6 950 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 GREB1LQ9C091 1923 aaPredicted RBP33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 FOXN1O15353 648 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 BMP15O95972 392 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 PTGDRQ13258 359 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 SPDYE2Q495Y8 402 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 RRP36Q96EU6 259 aaKnown RBP33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 TUBE1Q9UJT0 475 aa33.1■■■□□ 2.89
CSNK1E-205ENST00000405675 POLR2DO15514 142 aaKnown RBP33.09■■■□□ 2.89
CSNK1E-205ENST00000405675 NLRP12P59046 1061 aa33.09■■■□□ 2.89
CSNK1E-205ENST00000405675 ATP2C1P98194 919 aaPredicted RBP33.09■■■□□ 2.89
CSNK1E-205ENST00000405675 ZBED3Q96IU2 234 aaPredicted RBP33.09■■■□□ 2.89
CSNK1E-205ENST00000405675 RPS12P25398 132 aaKnown RBP33.08■■■□□ 2.89
CSNK1E-205ENST00000405675 GMPSP49915 693 aaPredicted RBP33.08■■■□□ 2.89
CSNK1E-205ENST00000405675 RIOX1Q9H6W3 641 aa33.08■■■□□ 2.89
CSNK1E-205ENST00000405675 ZNF541Q9H0D2 1346 aa33.08■■■□□ 2.89
CSNK1E-205ENST00000405675 NBPF9Q3BBW0 867 aa33.08■■■□□ 2.89
CSNK1E-205ENST00000405675 WNT10BO00744 389 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 MCM7P33993 719 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 MDM2Q00987 491 aaPredicted RBP33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 ISM2Q6H9L7 571 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 FOXP4Q8IVH2 680 aaPredicted RBP33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 FERMT2Q96AC1 680 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 EPSTI1Q96J88 318 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 VEZTQ9HBM0 779 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 SERTAD1Q9UHV2 236 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 CLCN1P35523 988 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 ZNF280AP59817 542 aaPredicted RBP33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 ASPRV1Q53RT3 343 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 CCDC17Q96LX7 622 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 GPCPD1Q9NPB8 672 aa33.07■■■□□ 2.88
CSNK1E-205ENST00000405675 EGFRP00533 1210 aa33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 NAPAP54920 295 aa33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 ATP2B2Q01814 1243 aa33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 ZRSR1Q15695 479 aaKnown RBP33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 RBM26Q5T8P6 1007 aaKnown RBP33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 GALNT17Q6IS24 598 aa33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 AOPEPQ8N6M6 819 aa33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 PDILTQ8N807 584 aa33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 ATRNL1Q5VV63 1379 aa33.06■■■□□ 2.88
CSNK1E-205ENST00000405675 GOLGA6L19H0YKK7 550 aa33.05■■■□□ 2.88
CSNK1E-205ENST00000405675 LMNB1P20700 586 aa33.05■■■□□ 2.88
CSNK1E-205ENST00000405675 ZMYND12Q9H0C1 365 aa33.05■■■□□ 2.88
CSNK1E-205ENST00000405675 ZKSCAN5Q9Y2L8 839 aa33.05■■■□□ 2.88
CSNK1E-205ENST00000405675 A0A087X0B3 334 aa33.05■■■□□ 2.88
CSNK1E-205ENST00000405675 NAT10Q9H0A0 1025 aaKnown RBP33.05■■■□□ 2.88
CSNK1E-205ENST00000405675 SEC63Q9UGP8 760 aaKnown RBP33.05■■■□□ 2.88
CSNK1E-205ENST00000405675 CCDC194A0A1B0GVG4 234 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 ACTN4O43707 911 aaKnown RBP33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 ZNF543Q08ER8 600 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 IL17AQ16552 155 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 MICALL2Q8IY33 904 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 SYMPKQ92797 1274 aaKnown RBP33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 CNTNAP1P78357 1384 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 VWA3AA6NCI4 1184 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 BECN2A8MW95 431 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 ZNF75DP51815 510 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 ELOA2Q8IYF1 753 aaPredicted RBP33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 C4orf32Q8N8J7 132 aa33.04■■■□□ 2.88
CSNK1E-205ENST00000405675 MYO1BO43795 1136 aa33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 YBX3P16989 372 aaKnown RBP eCLIP33.03■■■□□ 2.883e-7■□□□□ 10.1
CSNK1E-205ENST00000405675 CERKLQ49MI3 558 aaPredicted RBP33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 PLA2G4DQ86XP0 818 aa33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 FAM177A1Q8N128 213 aaPredicted RBP33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 SPC24Q8NBT2 197 aa33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 FAM151AQ8WW52 585 aa33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 DPF2Q92785 391 aa33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 CSRNP1Q96S65 589 aa33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 CNOT7Q9UIV1 285 aaKnown RBP33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP33.03■■■□□ 2.88
CSNK1E-205ENST00000405675 TTBK2Q6IQ55 1244 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 TATDN1Q6P1N9 297 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 TRIM34Q9BYJ4 488 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 TRIM5Q9C035 493 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 PCDHA5Q9Y5H7 936 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 SMCO2A6NFE2 343 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 PRR29P0C7W0 189 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 MSNP26038 577 aaKnown RBP33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 INF2Q27J81 1249 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 GRAMD1CQ8IYS0 662 aa33.02■■■□□ 2.88
CSNK1E-205ENST00000405675 SAMD7Q7Z3H4 446 aa33.01■■■□□ 2.88
CSNK1E-205ENST00000405675 ZNF830Q96NB3 372 aaPredicted RBP33.01■■■□□ 2.88
CSNK1E-205ENST00000405675 BPIFA3Q9BQP9 254 aa33.01■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms