RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 CAGE1Q8TC20 777 aa10.9□□□□□ -0.66
TNFSF11-204ENST00000405262 JAKMIP2Q96AA8 810 aa10.9□□□□□ -0.66
TNFSF11-204ENST00000405262 SPAG5Q96R06 1193 aa10.9□□□□□ -0.66
TNFSF11-204ENST00000405262 SAMSN1Q9NSI8 373 aaKnown RBP10.9□□□□□ -0.66
TNFSF11-204ENST00000405262 UBN2Q6ZU65 1347 aa10.9□□□□□ -0.66
TNFSF11-204ENST00000405262 PNPLA7Q6ZV29 1317 aa10.9□□□□□ -0.66
TNFSF11-204ENST00000405262 ZNF609O15014 1411 aa10.9□□□□□ -0.66
TNFSF11-204ENST00000405262 EME2A4GXA9 379 aaPredicted RBP10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 SASH1O94885 1247 aa10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 NR1D1P20393 614 aa10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 TAF7Q15545 349 aaPredicted RBP10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 WASHC4Q2M389 1173 aa10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 MPRIPQ6WCQ1 1025 aa10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 MREGQ8N565 214 aa10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 DRAXINQ8NBI3 349 aaPredicted RBP10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 SPATA20Q8TB22 786 aa10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 RNPC3Q96LT9 517 aaKnown RBP10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 MOV10L1Q9BXT6 1211 aaKnown RBP10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 TRPC6Q9Y210 931 aa10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 EPN1Q9Y6I3 576 aaPredicted RBP10.9□□□□□ -0.67
TNFSF11-204ENST00000405262 C5orf60A6NFR6 353 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 SMNDC1O75940 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 ECM2O94769 699 aaPredicted RBP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 NDUFA10O95299 355 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 ATP1A1P05023 1023 aaKnown RBP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 MARCKSP29966 332 aaPredicted RBP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 FXR1P51114 621 aaKnown RBP eCLIP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 RAB27AP51159 221 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 KRT83P78385 493 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 HDLBPQ00341 1268 aaKnown RBP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 MFN1Q8IWA4 741 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 GSPT2Q8IYD1 628 aaKnown RBP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 CUL5Q93034 780 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 BORCS6Q96GS4 357 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 GDAP1L1Q96MZ0 367 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 FHDC1Q9C0D6 1143 aaPredicted RBP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 PHAXQ9H814 394 aaKnown RBP10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 TFCP2L1Q9NZI6 479 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 C15orf41Q9Y2V0 281 aa10.89□□□□□ -0.67
TNFSF11-204ENST00000405262 KIF28PB7ZC32 967 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 ATP6V1G2O95670 118 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 PRLRP16471 622 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 SCTRP47872 440 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 E2F5Q15329 346 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 TTC39AQ5SRH9 613 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 SLC9C2Q5TAH2 1124 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 MIS18BP1Q6P0N0 1132 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 BZW1Q7L1Q6 419 aaKnown RBP10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 IQCKQ8N0W5 287 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 TRIM58Q8NG06 486 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 CPLX3Q8WVH0 158 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 ANKRD27Q96NW4 1050 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 MAP3K14Q99558 947 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 HAUS2Q9NVX0 235 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 GUCA1BQ9UMX6 200 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 C5P01031 1676 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 PALLDQ8WX93 1383 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 GOLGB1Q14789 3259 aaKnown RBP10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 FRMD3A2A2Y4 597 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 LRRC10BA6NIK2 292 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 GNAT3A8MTJ3 354 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 KRT86O43790 486 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 BUB1BO60566 1050 aaPredicted RBP10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 ABL1P00519 1130 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 GSTA1P08263 222 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 SPAG1Q07617 926 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 NKX1-1Q15270 411 aaPredicted RBP10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 CCDC38Q502W7 563 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 HSP90AA4PQ58FG1 418 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 KRI1Q8N9T8 703 aaKnown RBP10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 ZIM3Q96PE6 472 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 MED15Q96RN5 788 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 SLF1Q9BQI6 1058 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 OSBPL7Q9BZF2 842 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 CCDC8Q9H0W5 538 aaPredicted RBP10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 NOD2Q9HC29 1040 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 SLC39A2Q9NP94 309 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 HELLSQ9NRZ9 838 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 TAF1LQ8IZX4 1826 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 IGSF1Q8N6C5 1336 aa10.88□□□□□ -0.67
TNFSF11-204ENST00000405262 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 E7EWF7 191 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 ZMYND10O75800 440 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 LUC7L3O95232 432 aaKnown RBP10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 PIP4K2AP48426 406 aaPredicted RBP10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 KCNB1Q14721 858 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 TRMT44Q8IYL2 757 aaKnown RBP10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 PIGBQ92521 554 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 RRP36Q96EU6 259 aaKnown RBP10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 ATP6V1G3Q96LB4 118 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 STIM2Q9P246 746 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 HDAC6Q9UBN7 1215 aa10.87□□□□□ -0.67
TNFSF11-204ENST00000405262 LIMA1Q9UHB6 759 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms