RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 VAT1LQ9HCJ6 419 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 PNMA3Q9UL41 463 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 TESPA1A2RU30 521 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 SMARCA1P28370 1054 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 AKAP17AQ02040 695 aaKnown RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 KIF23Q02241 960 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 COG2Q14746 738 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 SYDE2Q5VT97 1194 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 ANKRD23Q86SG2 305 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 PRPF38AQ8NAV1 312 aaKnown RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 SLF1Q9BQI6 1058 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 FAM217BQ9NTX9 383 aaPredicted RBP18.28■□□□□ 0.52
CDPF1-204ENST00000404744 HOXC10Q9NYD6 342 aa18.28■□□□□ 0.52
CDPF1-204ENST00000404744 BTBD19C9JJ37 291 aa18.27■□□□□ 0.51
CDPF1-204ENST00000404744 MOGSQ13724 837 aa18.27■□□□□ 0.51
CDPF1-204ENST00000404744 GPAT2Q6NUI2 795 aa18.27■□□□□ 0.51
CDPF1-204ENST00000404744 BTNL9Q6UXG8 535 aa18.27■□□□□ 0.51
CDPF1-204ENST00000404744 TRIM22Q8IYM9 498 aa18.27■□□□□ 0.51
CDPF1-204ENST00000404744 CMTR1Q8N1G2 835 aaKnown RBP18.27■□□□□ 0.51
CDPF1-204ENST00000404744 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.51
CDPF1-204ENST00000404744 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.51
CDPF1-204ENST00000404744 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.27■□□□□ 0.51
CDPF1-204ENST00000404744 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
CDPF1-204ENST00000404744 PDHXO00330 501 aa18.26■□□□□ 0.51
CDPF1-204ENST00000404744 IFNAR1P17181 557 aa18.26■□□□□ 0.51
CDPF1-204ENST00000404744 SSRP1Q08945 709 aaKnown RBP18.26■□□□□ 0.51
CDPF1-204ENST00000404744 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
CDPF1-204ENST00000404744 SPZ1Q9BXG8 430 aa18.26■□□□□ 0.51
CDPF1-204ENST00000404744 CPVLQ9H3G5 476 aa18.26■□□□□ 0.51
CDPF1-204ENST00000404744 FBXO28Q9NVF7 368 aa18.26■□□□□ 0.51
CDPF1-204ENST00000404744 PPP1R9AQ9ULJ8 1098 aa18.26■□□□□ 0.51
CDPF1-204ENST00000404744 PTPRFP10586 1907 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 AOC2O75106 756 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 FDX1P10109 184 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 DSG3P32926 999 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 VEGFBP49765 207 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 RRP36Q96EU6 259 aaKnown RBP18.25■□□□□ 0.51
CDPF1-204ENST00000404744 LLPHQ9BRT6 129 aaKnown RBP18.25■□□□□ 0.51
CDPF1-204ENST00000404744 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 ASCC2Q9H1I8 757 aaPredicted RBP18.25■□□□□ 0.51
CDPF1-204ENST00000404744 RIOX1Q9H6W3 641 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 SEC63Q9UGP8 760 aaKnown RBP18.25■□□□□ 0.51
CDPF1-204ENST00000404744 PRR12Q9ULL5 1215 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 MYPNQ86TC9 1320 aa18.25■□□□□ 0.51
CDPF1-204ENST00000404744 LOC285556D6RIA3 1793 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 ZBED4O75132 1171 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 CUL4AQ13619 759 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 NBPF11Q86T75 865 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 HOMER1Q86YM7 354 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 PIBF1Q8WXW3 757 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 PHKBQ93100 1093 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 PTPN18Q99952 460 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 RBM27Q9P2N5 1060 aaKnown RBP18.24■□□□□ 0.51
CDPF1-204ENST00000404744 PCNTO95613 3336 aa18.24■□□□□ 0.51
CDPF1-204ENST00000404744 MAP2K2P36507 400 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 TM4SF4P48230 202 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 NTRK3Q16288 839 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 IFNL1Q8IU54 200 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 SMCR8Q8TEV9 937 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 PARK7Q99497 189 aaKnown RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 P2RX7Q99572 595 aaKnown RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 RNF26Q9BY78 433 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 ZCCHC17Q9NP64 241 aaKnown RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 V9GY48 417 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 PRPF3O43395 683 aaKnown RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 CYTH3O43739 400 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 PPFIA3O75145 1194 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 FMNL1O95466 1100 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 HMGN5P82970 282 aaKnown RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 ST3GAL1Q11201 340 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 FAM184AQ8NB25 1140 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 NSUN7Q8NE18 718 aaKnown RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 GTF3C2Q8WUA4 911 aaPredicted RBP18.23■□□□□ 0.51
CDPF1-204ENST00000404744 ATG4CQ96DT6 458 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 PIGSQ96S52 555 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 ZIC5Q96T25 663 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 KIF3AQ9Y496 699 aa18.23■□□□□ 0.51
CDPF1-204ENST00000404744 CNTNAP5Q8WYK1 1306 aa18.22■□□□□ 0.51
CDPF1-204ENST00000404744 PTPDC1A2A3K4 754 aa18.22■□□□□ 0.51
CDPF1-204ENST00000404744 IGF2BP3O00425 579 aaKnown RBP eCLIP18.22■□□□□ 0.51
CDPF1-204ENST00000404744 ALDH1A1P00352 501 aa18.22■□□□□ 0.51
CDPF1-204ENST00000404744 HERVK_113P62684 666 aa18.22■□□□□ 0.51
CDPF1-204ENST00000404744 TAF1CQ15572 869 aaPredicted RBP18.22■□□□□ 0.51
CDPF1-204ENST00000404744 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
CDPF1-204ENST00000404744 WASF1Q92558 559 aa18.22■□□□□ 0.51
CDPF1-204ENST00000404744 DDX11Q96FC9 970 aa18.22■□□□□ 0.51
CDPF1-204ENST00000404744 INTS4Q96HW7 963 aaKnown RBP18.22■□□□□ 0.51
CDPF1-204ENST00000404744 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
CDPF1-204ENST00000404744 ORC3Q9UBD5 711 aaPredicted RBP18.22■□□□□ 0.51
CDPF1-204ENST00000404744 PNMA6FA0A0J9YX94 578 aa18.21■□□□□ 0.51
CDPF1-204ENST00000404744 SPDYE16A6NNV3 312 aaPredicted RBP18.21■□□□□ 0.51
CDPF1-204ENST00000404744 VWA5AO00534 786 aa18.21■□□□□ 0.51
CDPF1-204ENST00000404744 ZBTB5O15062 677 aa18.21■□□□□ 0.51
CDPF1-204ENST00000404744 DEXIO95424 95 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms