RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 FAM207AQ9NSI2 230 aaPredicted RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 LMO7Q8WWI1 1683 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 BUB1O43683 1085 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 ATP2C2O75185 946 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 GUCY2FP51841 1108 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 APBA1Q02410 837 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 TBC1D8BQ0IIM8 1120 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 IFIT1BQ5T764 474 aaKnown RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 CCNI2Q6ZMN8 369 aaPredicted RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 MB21D1Q8N884 522 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 ZNF579Q8NAF0 562 aaKnown RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 ZCRB1Q8TBF4 217 aaKnown RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 CAPN7Q9Y6W3 813 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 CCDC196A0A1B0GTZ2 297 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 TRHP20396 242 aaPredicted RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 RNF187Q5TA31 235 aaPredicted RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 RUFY1Q96T51 708 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 NHEJ1Q9H9Q4 299 aaPredicted RBP10.72□□□□□ -0.69
SMC1B-202ENST00000404354 CAPN6Q9Y6Q1 641 aa10.72□□□□□ -0.69
SMC1B-202ENST00000404354 NDUFAB1O14561 156 aa10.71□□□□□ -0.69
SMC1B-202ENST00000404354 KRT86O43790 486 aa10.71□□□□□ -0.69
SMC1B-202ENST00000404354 GUCY2CP25092 1073 aa10.71□□□□□ -0.69
SMC1B-202ENST00000404354 CCDC178Q5BJE1 867 aa10.71□□□□□ -0.69
SMC1B-202ENST00000404354 WDR93Q6P2C0 686 aa10.71□□□□□ -0.69
SMC1B-202ENST00000404354 ENAHQ8N8S7 591 aaPredicted RBP10.71□□□□□ -0.69
SMC1B-202ENST00000404354 ZBTB38Q8NAP3 1195 aaPredicted RBP10.71□□□□□ -0.69
SMC1B-202ENST00000404354 TSEN2Q8NCE0 465 aaKnown RBP10.71□□□□□ -0.69
SMC1B-202ENST00000404354 SSBP05455 408 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMC1B-202ENST00000404354 MTIF2P46199 727 aaKnown RBP10.71□□□□□ -0.69
SMC1B-202ENST00000404354 SH3RF1Q7Z6J0 888 aa10.71□□□□□ -0.69
SMC1B-202ENST00000404354 HAUS4Q9H6D7 363 aa10.71□□□□□ -0.69
SMC1B-202ENST00000404354 MAGEC2Q9UBF1 373 aaPredicted RBP10.71□□□□□ -0.69
SMC1B-202ENST00000404354 LIMA1Q9UHB6 759 aaKnown RBP10.71□□□□□ -0.69
SMC1B-202ENST00000404354 TRADDQ15628 312 aa10.71□□□□□ -0.7
SMC1B-202ENST00000404354 CCDC181Q5TID7 509 aa10.71□□□□□ -0.7
SMC1B-202ENST00000404354 CCDC51Q96ER9 411 aa10.71□□□□□ -0.7
SMC1B-202ENST00000404354 CPVLQ9H3G5 476 aa10.71□□□□□ -0.7
SMC1B-202ENST00000404354 CNNM2Q9H8M5 875 aa10.71□□□□□ -0.7
SMC1B-202ENST00000404354 ZNHIT6Q9NWK9 470 aaKnown RBP10.71□□□□□ -0.7
SMC1B-202ENST00000404354 OVOS2A0A0G2JMS6 1433 aa10.71□□□□□ -0.7
SMC1B-202ENST00000404354 WDR19Q8NEZ3 1342 aa10.71□□□□□ -0.7
SMC1B-202ENST00000404354 PCCAP05165 728 aaPredicted RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 INPP5BP32019 993 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 SEC24CP53992 1094 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 CTSWP56202 376 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 GUCY1A3Q02108 690 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 ARID5AQ03989 594 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 KIF5AQ12840 1032 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 C2CD5Q86YS7 1000 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 CSGALNACT2Q8N6G5 542 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 CTCFLQ8NI51 663 aaPredicted RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 KANSL2Q9H9L4 492 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 ZC3H4Q9UPT8 1303 aaKnown RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 A0A087WUV0 522 aaPredicted RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 HPDP32754 393 aaPredicted RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 EFCAB13Q8IY85 973 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 CCDC42Q96M95 316 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 MMRN2Q9H8L6 949 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 BRMS1Q9HCU9 246 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 RWDD2AQ9UIY3 292 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 SPATA31A3Q5VYP0 1347 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 STK36Q9NRP7 1315 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 SHTN1A0MZ66 631 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 ECM2O94769 699 aaPredicted RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 HNRNPH1P31943 449 aaKnown RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 CATIPQ7Z7H3 387 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 NLRP10Q86W26 655 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 CCDC155Q8N6L0 562 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 JPH2Q9BR39 696 aaPredicted RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 TUBGCP2Q9BSJ2 902 aa10.7□□□□□ -0.7
SMC1B-202ENST00000404354 PACSIN2Q9UNF0 486 aaPredicted RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
SMC1B-202ENST00000404354 FER1L4A9Z1Z3 1794 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 ZNF263O14978 683 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 DNAAF5Q86Y56 855 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 PRDM11Q9NQV5 511 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 MYH10P35580 1976 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 RGPD5Q99666 1765 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 PSMD14O00487 310 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 AKR1B10O60218 316 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 FCER1AP12319 257 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 GYG1P46976 350 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 ZNF658Q5TYW1 1059 aaPredicted RBP10.69□□□□□ -0.7
SMC1B-202ENST00000404354 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 MMS22LQ6ZRQ5 1243 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 EP400NLQ6ZTU2 488 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 SRBD1Q8N5C6 995 aaKnown RBP10.69□□□□□ -0.7
SMC1B-202ENST00000404354 ESR2Q92731 530 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 SECISBP2LQ93073 1101 aaKnown RBP10.69□□□□□ -0.7
SMC1B-202ENST00000404354 PHF20Q9BVI0 1012 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 GOLGB1Q14789 3259 aaKnown RBP10.69□□□□□ -0.7
SMC1B-202ENST00000404354 EPHB6O15197 1021 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 RPS6KA5O75582 802 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 CSF1RP07333 972 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 SPA17Q15506 151 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 NFU1Q9UMS0 254 aa10.69□□□□□ -0.7
SMC1B-202ENST00000404354 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
SMC1B-202ENST00000404354 FAM153BP0C7A2 387 aa10.68□□□□□ -0.7
SMC1B-202ENST00000404354 CYLC1P35663 651 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms