RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 WTIPA6NIX2 430 aaPredicted RBP22.4■■□□□ 1.18
CCDC47-202ENST00000403162 TULP2O00295 520 aa22.4■■□□□ 1.18
CCDC47-202ENST00000403162 CASP1P29466 404 aa22.4■■□□□ 1.18
CCDC47-202ENST00000403162 BCAMP50895 628 aa22.4■■□□□ 1.18
CCDC47-202ENST00000403162 TNFRSF25Q93038 417 aa22.4■■□□□ 1.18
CCDC47-202ENST00000403162 RBM28Q9NW13 759 aaKnown RBP22.4■■□□□ 1.18
CCDC47-202ENST00000403162 LRP2BPQ9P2M1 347 aa22.4■■□□□ 1.18
CCDC47-202ENST00000403162 LIMA1Q9UHB6 759 aaKnown RBP22.4■■□□□ 1.18
CCDC47-202ENST00000403162 A0A0U1RQJ8 604 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 CTAGE9A4FU28 777 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 LRRC10BA6NIK2 292 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 FXR1P51114 621 aaKnown RBP eCLIP22.39■■□□□ 1.18
CCDC47-202ENST00000403162 UBE4AQ14139 1066 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 MUM1L1Q5H9M0 696 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 ZNF569Q5MCW4 686 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 STYK1Q6J9G0 422 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 TMTC1Q8IUR5 882 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 ENAHQ8N8S7 591 aaPredicted RBP22.39■■□□□ 1.18
CCDC47-202ENST00000403162 ATRIPQ8WXE1 791 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 BRMS1Q9HCU9 246 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 PSD3Q9NYI0 1048 aa22.39■■□□□ 1.18
CCDC47-202ENST00000403162 A0A1B0GUL6 1792 aa22.39■■□□□ 1.17
CCDC47-202ENST00000403162 MYH8P13535 1937 aa22.39■■□□□ 1.17
CCDC47-202ENST00000403162 SMYD4Q8IYR2 804 aaPredicted RBP22.39■■□□□ 1.17
CCDC47-202ENST00000403162 NEK11Q8NG66 645 aa22.39■■□□□ 1.17
CCDC47-202ENST00000403162 ZSCAN10Q96SZ4 725 aaPredicted RBP22.39■■□□□ 1.17
CCDC47-202ENST00000403162 ATP2C1P98194 919 aaPredicted RBP22.38■■□□□ 1.17
CCDC47-202ENST00000403162 BEND6Q5SZJ8 279 aaPredicted RBP22.38■■□□□ 1.17
CCDC47-202ENST00000403162 TMC4Q7Z404 712 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 ZSWIM4Q9H7M6 989 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 MYO1AQ9UBC5 1043 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 CTNND2Q9UQB3 1225 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 WNT7AO00755 349 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 CYP7A1P22680 504 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 TRIM14Q14142 442 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 E2F4Q16254 413 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 KIF4BQ2VIQ3 1234 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 TTC38Q5R3I4 469 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 CATIPQ7Z7H3 387 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 EXOC4Q96A65 974 aa22.38■■□□□ 1.17
CCDC47-202ENST00000403162 PYM1Q9BRP8 204 aaKnown RBP22.38■■□□□ 1.17
CCDC47-202ENST00000403162 PUF60Q9UHX1 559 aaKnown RBP22.38■■□□□ 1.17
CCDC47-202ENST00000403162 XDHP47989 1333 aa22.37■■□□□ 1.17
CCDC47-202ENST00000403162 MINDY4BA8MYZ0 360 aa22.37■■□□□ 1.17
CCDC47-202ENST00000403162 GPSM2P81274 684 aa22.37■■□□□ 1.17
CCDC47-202ENST00000403162 SPAG1Q07617 926 aa22.37■■□□□ 1.17
CCDC47-202ENST00000403162 KRT31Q15323 416 aa22.37■■□□□ 1.17
CCDC47-202ENST00000403162 NPY5RQ15761 445 aa22.37■■□□□ 1.17
CCDC47-202ENST00000403162 ABHD10Q9NUJ1 306 aa22.37■■□□□ 1.17
CCDC47-202ENST00000403162 RWDD2AQ9UIY3 292 aa22.37■■□□□ 1.17
CCDC47-202ENST00000403162 MYH13Q9UKX3 1938 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 PRDM1O75626 825 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 CALM1P0DP23 149 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 CALM2P0DP24 149 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 CALM3P0DP25 149 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 SLC35F6Q8N357 371 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 SDR42E1Q8WUS8 393 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 V9GY48 417 aaPredicted RBP22.36■■□□□ 1.17
CCDC47-202ENST00000403162 ZNF804BA4D1E1 1349 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 H3BQF6 201 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 ERLIN1O75477 346 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 PLEKHA8P1O95397 391 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 IRX5P78411 483 aaPredicted RBP22.36■■□□□ 1.17
CCDC47-202ENST00000403162 WHAMMP3Q1A5X7 153 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 IFIT1BQ5T764 474 aaKnown RBP22.36■■□□□ 1.17
CCDC47-202ENST00000403162 ADGRA1Q86SQ6 560 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 SP8Q8IXZ3 490 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 IQUBQ8NA54 791 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 NAPGQ99747 312 aaPredicted RBP22.36■■□□□ 1.17
CCDC47-202ENST00000403162 ATP6V0A2Q9Y487 856 aa22.36■■□□□ 1.17
CCDC47-202ENST00000403162 MAGEB6P1A0A0J9YX57 407 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 ERVK-24P63145 666 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 ZNF174Q15697 407 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 CYP26C1Q6V0L0 522 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 HDXQ7Z353 690 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 ACRBPQ8NEB7 543 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 CNKSR1Q969H4 720 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 PNKPQ96T60 521 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 N4BP3O15049 544 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 TROAPQ12815 778 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 PTGDRQ13258 359 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 PDXDC2PQ6P474 469 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 ADAM21Q9UKJ8 722 aa22.35■■□□□ 1.17
CCDC47-202ENST00000403162 DDAH1O94760 285 aa22.34■■□□□ 1.17
CCDC47-202ENST00000403162 PCP11498 1178 aaKnown RBP22.34■■□□□ 1.17
CCDC47-202ENST00000403162 CCT6AP40227 531 aaKnown RBP22.34■■□□□ 1.17
CCDC47-202ENST00000403162 COPB1P53618 953 aaKnown RBP22.34■■□□□ 1.17
CCDC47-202ENST00000403162 TMTC3Q6ZXV5 915 aa22.34■■□□□ 1.17
CCDC47-202ENST00000403162 SGIP1Q9BQI5 828 aa22.34■■□□□ 1.17
CCDC47-202ENST00000403162 PPP1R1BQ9UD71 204 aaPredicted RBP22.34■■□□□ 1.17
CCDC47-202ENST00000403162 LEMD3Q9Y2U8 911 aa22.34■■□□□ 1.17
CCDC47-202ENST00000403162 hCG_1642624A0A1W2PR95 340 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 GTPBP6O43824 516 aaPredicted RBP22.33■■□□□ 1.17
CCDC47-202ENST00000403162 TUBBP07437 444 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 FGRP09769 529 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 KLRK1P26718 216 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 ARHGAP25P42331 645 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 GYG1P46976 350 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 TRAPPC10P48553 1259 aa22.33■■□□□ 1.17
CCDC47-202ENST00000403162 PAK1Q13153 545 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms