RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 RIPK3Q9Y572 518 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 A0A0G2JMZ2 1700 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 RLFQ13129 1914 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 TIMP1P01033 207 aa17.48■□□□□ 0.39
VAMP1-203ENST00000400911 DNAJB2P25686 324 aa17.48■□□□□ 0.39
VAMP1-203ENST00000400911 SLC4A3P48751 1232 aa17.48■□□□□ 0.39
VAMP1-203ENST00000400911 SNRNP48Q6IEG0 339 aaKnown RBP17.48■□□□□ 0.39
VAMP1-203ENST00000400911 CCSAPQ6IQ19 270 aaPredicted RBP17.48■□□□□ 0.39
VAMP1-203ENST00000400911 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
VAMP1-203ENST00000400911 MSL3Q8N5Y2 521 aaKnown RBP17.48■□□□□ 0.39
VAMP1-203ENST00000400911 TEX13BQ9BXU2 312 aa17.48■□□□□ 0.39
VAMP1-203ENST00000400911 PRDM6Q9NQX0 595 aa17.48■□□□□ 0.39
VAMP1-203ENST00000400911 ZHX1Q9UKY1 873 aaPredicted RBP17.48■□□□□ 0.39
VAMP1-203ENST00000400911 ROBO3Q96MS0 1386 aa17.48■□□□□ 0.39
VAMP1-203ENST00000400911 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
VAMP1-203ENST00000400911 MYADML2A6NDP7 307 aa17.47■□□□□ 0.39
VAMP1-203ENST00000400911 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
VAMP1-203ENST00000400911 IRX5P78411 483 aaPredicted RBP17.47■□□□□ 0.39
VAMP1-203ENST00000400911 MAMDC4Q6UXC1 1216 aa17.47■□□□□ 0.39
VAMP1-203ENST00000400911 USP38Q8NB14 1042 aa17.47■□□□□ 0.39
VAMP1-203ENST00000400911 SYMPKQ92797 1274 aaKnown RBP17.47■□□□□ 0.39
VAMP1-203ENST00000400911 ZBTB40Q9NUA8 1239 aa17.47■□□□□ 0.39
VAMP1-203ENST00000400911 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
VAMP1-203ENST00000400911 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 DNAJC25-GNG10A0A024R161 153 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 F5H6K3 240 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 DUSP11O75319 330 aaKnown RBP17.46■□□□□ 0.39
VAMP1-203ENST00000400911 KLRC3Q07444 240 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 CPXCR1Q8N123 301 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 PRPF38AQ8NAV1 312 aaKnown RBP17.46■□□□□ 0.39
VAMP1-203ENST00000400911 VTI1AQ96AJ9 217 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 TIFAQ96CG3 184 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.46■□□□□ 0.39
VAMP1-203ENST00000400911 ZNF576Q9H609 170 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 MKNK2Q9HBH9 465 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 TBX21Q9UL17 535 aa17.46■□□□□ 0.39
VAMP1-203ENST00000400911 NDUFB10O96000 172 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 CDK7P50613 346 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 ACVR2BQ13705 512 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 MFSD5Q6N075 450 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 C16orf59Q7L2K0 433 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 GLT1D1Q96MS3 346 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
VAMP1-203ENST00000400911 NYAP2Q9P242 653 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 ARPP21Q9UBL0 812 aaPredicted RBP17.45■□□□□ 0.38
VAMP1-203ENST00000400911 COG6Q9Y2V7 657 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 ELP1O95163 1332 aa17.45■□□□□ 0.38
VAMP1-203ENST00000400911 GRXCR1A8MXD5 290 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 ADCY6O43306 1168 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 ZBED4O75132 1171 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 ASGR1P07306 291 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 C6orf222P0C671 652 aaPredicted RBP17.44■□□□□ 0.38
VAMP1-203ENST00000400911 MS4A1P11836 297 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 RASA1P20936 1047 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 PBX2P40425 430 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 ZNF467Q7Z7K2 595 aaPredicted RBP17.44■□□□□ 0.38
VAMP1-203ENST00000400911 KIFC2Q96AC6 838 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 RAVER2Q9HCJ3 691 aaKnown RBP17.44■□□□□ 0.38
VAMP1-203ENST00000400911 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.44■□□□□ 0.38
VAMP1-203ENST00000400911 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
VAMP1-203ENST00000400911 CTDP1Q9Y5B0 961 aaPredicted RBP17.44■□□□□ 0.38
VAMP1-203ENST00000400911 MINDY4BA8MYZ0 360 aa17.43■□□□□ 0.38
VAMP1-203ENST00000400911 ATP2A1O14983 1001 aa17.43■□□□□ 0.38
VAMP1-203ENST00000400911 PPIGQ13427 754 aaKnown RBP eCLIP17.43■□□□□ 0.388e-7■■■□□ 14.9
VAMP1-203ENST00000400911 CCDC144BQ3MJ40 725 aa17.43■□□□□ 0.38
VAMP1-203ENST00000400911 SBK1Q52WX2 424 aa17.43■□□□□ 0.38
VAMP1-203ENST00000400911 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
VAMP1-203ENST00000400911 ANKRD35Q8N283 1001 aa17.43■□□□□ 0.38
VAMP1-203ENST00000400911 PCSK9Q8NBP7 692 aaKnown RBP17.43■□□□□ 0.38
VAMP1-203ENST00000400911 DDX19BQ9UMR2 479 aa17.43■□□□□ 0.38
VAMP1-203ENST00000400911 MROH7Q68CQ1 1323 aa17.43■□□□□ 0.38
VAMP1-203ENST00000400911 GSG1L2A8MUP6 293 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 ARVCFO00192 962 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 ACRP10323 421 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 CSF2RAP15509 400 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 CST5P28325 142 aaPredicted RBP17.42■□□□□ 0.38
VAMP1-203ENST00000400911 TJAP1Q5JTD0 557 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 GNASQ5JWF2 1037 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 CCDC129Q6ZRS4 1044 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 FGD4Q96M96 766 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 PBX4Q9BYU1 374 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 ABHD16BQ9H3Z7 469 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 SPC25Q9HBM1 224 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 SLC38A10Q9HBR0 1119 aa17.42■□□□□ 0.38
VAMP1-203ENST00000400911 A0A0U1RQG5 324 aaPredicted RBP17.41■□□□□ 0.38
VAMP1-203ENST00000400911 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
VAMP1-203ENST00000400911 GJA9P57773 515 aa17.41■□□□□ 0.38
VAMP1-203ENST00000400911 RASIP1Q5U651 963 aa17.41■□□□□ 0.38
VAMP1-203ENST00000400911 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
VAMP1-203ENST00000400911 ARMCX2Q7L311 632 aa17.41■□□□□ 0.38
VAMP1-203ENST00000400911 TMEM199Q8N511 208 aa17.41■□□□□ 0.38
VAMP1-203ENST00000400911 PPM1EQ8WY54 764 aa17.41■□□□□ 0.38
VAMP1-203ENST00000400911 PPP1R12CQ9BZL4 782 aa17.41■□□□□ 0.38
VAMP1-203ENST00000400911 UPF3AQ9H1J1 476 aaKnown RBP17.41■□□□□ 0.38
VAMP1-203ENST00000400911 IGKV6D-41A0A0C4DH26 115 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 CTAGE5O15320 804 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 PRDM1O75626 825 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 GIMAP6Q6P9H5 292 aa17.4■□□□□ 0.38
VAMP1-203ENST00000400911 ZNF365Q70YC5 407 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms