RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 PCDHA6Q9UN73 950 aa17.11■□□□□ 0.33
COL25A1-203ENST00000399132 PCDHA8Q9Y5H6 950 aa17.11■□□□□ 0.33
COL25A1-203ENST00000399132 MYH1P12882 1939 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 DDTLA6NHG4 134 aaPredicted RBP17.1■□□□□ 0.33
COL25A1-203ENST00000399132 TOP1P11387 765 aaKnown RBP17.1■□□□□ 0.33
COL25A1-203ENST00000399132 STX17P56962 302 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 TMED8Q6PL24 325 aaPredicted RBP17.1■□□□□ 0.33
COL25A1-203ENST00000399132 DPF2Q92785 391 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 CDK5RAP2Q96SN8 1893 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 OSBPL5Q9H0X9 879 aaPredicted RBP17.1■□□□□ 0.33
COL25A1-203ENST00000399132 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
COL25A1-203ENST00000399132 TCP11L1Q9NUJ3 509 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 TMEM260Q9NX78 707 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 MTMR4Q9NYA4 1195 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 SCAF8Q9UPN6 1271 aaKnown RBP17.1■□□□□ 0.33
COL25A1-203ENST00000399132 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 TMC6Q7Z403 805 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 TSC1Q92574 1164 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 TMEM60Q9H2L4 133 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 STK32BQ9NY57 414 aa17.1■□□□□ 0.33
COL25A1-203ENST00000399132 SMCO2A6NFE2 343 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 ANKS1AQ92625 1134 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 BARHL2Q9NY43 387 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
COL25A1-203ENST00000399132 FAM237AA0A1B0GTK4 181 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 PPIP5K2O43314 1243 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 GDF11O95390 407 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 SERPINC1P01008 464 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 PDHBP11177 359 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 GNAQP50148 359 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL25A1-203ENST00000399132 CCDC96Q2M329 555 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 MYRIPQ8NFW9 859 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 DLEC1Q9Y238 1755 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 SLX4Q8IY92 1834 aa17.09■□□□□ 0.33
COL25A1-203ENST00000399132 RAD17O75943 681 aa17.08■□□□□ 0.33
COL25A1-203ENST00000399132 CALML3P27482 149 aa17.08■□□□□ 0.33
COL25A1-203ENST00000399132 SHMT1P34896 483 aa17.08■□□□□ 0.33
COL25A1-203ENST00000399132 ATP2C1P98194 919 aaPredicted RBP17.08■□□□□ 0.33
COL25A1-203ENST00000399132 KARSQ15046 597 aaKnown RBP17.08■□□□□ 0.33
COL25A1-203ENST00000399132 PODNQ7Z5L7 613 aa17.08■□□□□ 0.33
COL25A1-203ENST00000399132 KIAA1524Q8TCG1 905 aa17.08■□□□□ 0.33
COL25A1-203ENST00000399132 RRP36Q96EU6 259 aaKnown RBP17.08■□□□□ 0.33
COL25A1-203ENST00000399132 PPP1R1BQ9UD71 204 aaPredicted RBP17.08■□□□□ 0.33
COL25A1-203ENST00000399132 CREBRFQ8IUR6 639 aa17.08■□□□□ 0.32
COL25A1-203ENST00000399132 HSD3B7Q9H2F3 369 aa17.08■□□□□ 0.32
COL25A1-203ENST00000399132 MAPK8IP1Q9UQF2 711 aa17.08■□□□□ 0.32
COL25A1-203ENST00000399132 CCNT1O60563 726 aaKnown RBP17.07■□□□□ 0.32
COL25A1-203ENST00000399132 SNAP25P60880 206 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 FANCCQ00597 558 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 GABPAQ06546 454 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 CCDC178Q5BJE1 867 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 DACT2Q5SW24 774 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 SARM1Q6SZW1 724 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 CERS3Q8IU89 383 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 DNAJC18Q9H819 358 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 HLA-DOAP06340 250 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 MYL5Q02045 173 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 ZNF579Q8NAF0 562 aaKnown RBP17.07■□□□□ 0.32
COL25A1-203ENST00000399132 PAGE5Q96GU1 130 aa17.07■□□□□ 0.32
COL25A1-203ENST00000399132 HOOK1Q9UJC3 728 aaKnown RBP17.07■□□□□ 0.32
COL25A1-203ENST00000399132 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
COL25A1-203ENST00000399132 CLRN2A0PK11 232 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 IGSF3O75054 1194 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 TPM4P67936 248 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 MRFAP1L1Q96HT8 127 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 C16orf45Q96MC5 204 aaPredicted RBP17.06■□□□□ 0.32
COL25A1-203ENST00000399132 CAMKK2Q96RR4 588 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 TMEM232C9JQI7 657 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
COL25A1-203ENST00000399132 TMEM132AQ24JP5 1023 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 ZNF277Q9NRM2 450 aaPredicted RBP17.06■□□□□ 0.32
COL25A1-203ENST00000399132 TRMT1Q9NXH9 659 aaKnown RBP17.06■□□□□ 0.32
COL25A1-203ENST00000399132 LRRC37AA6NMS7 1700 aa17.06■□□□□ 0.32
COL25A1-203ENST00000399132 TAL1P17542 331 aaPredicted RBP17.05■□□□□ 0.32
COL25A1-203ENST00000399132 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.05■□□□□ 0.32
COL25A1-203ENST00000399132 LRRC8AQ8IWT6 810 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 CCDC148Q8NFR7 591 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 TRIM34Q9BYJ4 488 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 FAM198AQ9UFP1 575 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 YDJCA8MPS7 323 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 TTLL1O95922 423 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 UBASH3AP57075 661 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 HHIPL2Q6UWX4 724 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 SH3BP5LQ7L8J4 393 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 GJA10Q969M2 543 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 ZFP91Q96JP5 570 aaPredicted RBP17.05■□□□□ 0.32
COL25A1-203ENST00000399132 SAMSN1Q9NSI8 373 aaKnown RBP17.05■□□□□ 0.32
COL25A1-203ENST00000399132 SCN9AQ15858 1988 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 TCP10L2B9ZVM9 353 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 UBE2SQ16763 222 aa17.05■□□□□ 0.32
COL25A1-203ENST00000399132 PRMT6Q96LA8 375 aaPredicted RBP17.05■□□□□ 0.32
COL25A1-203ENST00000399132 NUP88Q99567 741 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms