RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ASPRV1Q53RT3 343 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 GPATCH4Q5T3I0 446 aaKnown RBP10.38□□□□□ -0.75
BRCC3-206ENST00000399042 PRRT2Q7Z6L0 340 aaPredicted RBP10.38□□□□□ -0.75
BRCC3-206ENST00000399042 FBXL16Q8N461 479 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 NECAB1Q8N987 351 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 GMCL1Q96IK5 515 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 HHIPL1Q96JK4 782 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 SEC63Q9UGP8 760 aaKnown RBP10.38□□□□□ -0.75
BRCC3-206ENST00000399042 FEM1BQ9UK73 627 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
BRCC3-206ENST00000399042 KLRF2D3W0D1 207 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 K7ELQ4 463 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-206ENST00000399042 STK25O00506 426 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 ZBED4O75132 1171 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 C7P10643 843 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 VCAM1P19320 739 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 SLC16A2P36021 539 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 GJA5P36382 358 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 STAT2P52630 851 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 INHBEP58166 350 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 HTRA3P83110 453 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 ZNF543Q08ER8 600 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 TROAPQ12815 778 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 NOGQ13253 232 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 DGKZQ13574 1117 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 GRM4Q14833 912 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 IER5LQ5T953 404 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 FAM160B2Q86V87 743 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 CCDC83Q8IWF9 413 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 CCAR1Q8IX12 1150 aaKnown RBP10.37□□□□□ -0.75
BRCC3-206ENST00000399042 TRIM22Q8IYM9 498 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 PROCA1Q8NCQ7 364 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-206ENST00000399042 SMCR8Q8TEV9 937 aaPredicted RBP10.37□□□□□ -0.75
BRCC3-206ENST00000399042 AGXT2Q9BYV1 514 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 UBA5Q9GZZ9 404 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 NCOA5Q9HCD5 579 aaKnown RBP10.37□□□□□ -0.75
BRCC3-206ENST00000399042 TSHZ2Q9NRE2 1034 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 PNMA3Q9UL41 463 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 LAMA4Q16363 1823 aa10.37□□□□□ -0.75
BRCC3-206ENST00000399042 RASSF10A6NK89 507 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 PFKFB2O60825 505 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 PPFIA3O75145 1194 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 HSPA6P17066 643 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
BRCC3-206ENST00000399042 NOVP48745 357 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 RCAN1P53805 252 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 KIF23Q02241 960 aaPredicted RBP10.36□□□□□ -0.75
BRCC3-206ENST00000399042 SSRP1Q08945 709 aaKnown RBP10.36□□□□□ -0.75
BRCC3-206ENST00000399042 ME3Q16798 604 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 SH3D19Q5HYK7 790 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 SYDE2Q5VT97 1194 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 HOMER1Q86YM7 354 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 CMTR1Q8N1G2 835 aaKnown RBP10.36□□□□□ -0.75
BRCC3-206ENST00000399042 FAM184AQ8NB25 1140 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 SNX21Q969T3 373 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 RRP36Q96EU6 259 aaKnown RBP10.36□□□□□ -0.75
BRCC3-206ENST00000399042 TMX3Q96JJ7 454 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
BRCC3-206ENST00000399042 HOXC10Q9NYD6 342 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 AGTPBP1Q9UPW5 1226 aa10.36□□□□□ -0.75
BRCC3-206ENST00000399042 RBM19Q9Y4C8 960 aaKnown RBP10.36□□□□□ -0.75
BRCC3-206ENST00000399042 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.36□□□□□ -0.75
BRCC3-206ENST00000399042 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 PDHXO00330 501 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 AOC2O75106 756 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 CD2BP2O95400 341 aaKnown RBP10.35□□□□□ -0.75
BRCC3-206ENST00000399042 SCRN1Q12765 414 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 PLS1Q14651 629 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 COG2Q14746 738 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 KIAA1755Q5JYT7 1200 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 TREML2Q5T2D2 321 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 TTBK2Q6IQ55 1244 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 RASGRP2Q7LDG7 609 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 HS6ST3Q8IZP7 471 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 STAG2Q8N3U4 1231 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 PRPF38AQ8NAV1 312 aaKnown RBP10.35□□□□□ -0.75
BRCC3-206ENST00000399042 BRI3BPQ8WY22 251 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 GTF3C6Q969F1 213 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 C12orf42Q96LP6 360 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 PARK7Q99497 189 aaKnown RBP10.35□□□□□ -0.75
BRCC3-206ENST00000399042 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 SLC26A6Q9BXS9 759 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 MAD2L2Q9UI95 211 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 SMC3Q9UQE7 1217 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 KIF3AQ9Y496 699 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 STK24Q9Y6E0 443 aa10.35□□□□□ -0.75
BRCC3-206ENST00000399042 WDR33Q9C0J8 1336 aaKnown RBP10.34□□□□□ -0.75
BRCC3-206ENST00000399042 PALM3A6NDB9 673 aaPredicted RBP10.34□□□□□ -0.75
BRCC3-206ENST00000399042 BTBD19C9JJ37 291 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 PLEKHA8P1O95397 391 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 LARGE1O95461 756 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 CDC27P30260 824 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 VEGFBP49765 207 aa10.34□□□□□ -0.75
BRCC3-206ENST00000399042 EVCP57679 992 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms