RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 FOXO4P98177 505 aa16.23■□□□□ 0.19
RPRD1A-202ENST00000399022 NR5A1Q13285 461 aa16.23■□□□□ 0.19
RPRD1A-202ENST00000399022 IFI16Q16666 785 aaKnown RBP16.23■□□□□ 0.19
RPRD1A-202ENST00000399022 FAM182BQ5T319 152 aa16.23■□□□□ 0.19
RPRD1A-202ENST00000399022 CYP2D7A0A087X1C5 515 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 PCK1P35558 622 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 RASGRF1Q13972 1273 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 TGFBRAP1Q8WUH2 860 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 SPATA1Q5VX52 437 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 RUFY4Q6ZNE9 571 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 CACNA2D3Q8IZS8 1091 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 GPCPD1Q9NPB8 672 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 CEMIPQ8WUJ3 1361 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 CSGALNACT2Q8N6G5 542 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 PDIA6Q15084 440 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 KAZALD1Q96I82 304 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 MRFAP1Q9Y605 127 aa16.22■□□□□ 0.19
RPRD1A-202ENST00000399022 ADGRB2O60241 1585 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 CLTAP09496 248 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 SSR1P43307 286 aaKnown RBP16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 FMR1NBQ8N0W7 255 aaPredicted RBP16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 NELFBQ8WX92 580 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 CTNNBL1Q8WYA6 563 aaPredicted RBP16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 TRIM31Q9BZY9 425 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 MED23Q9ULK4 1368 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 GUCY2CP25092 1073 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 KRT71Q3SY84 523 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 SUSD4Q5VX71 490 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 ATG9AQ7Z3C6 839 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 GRAMD1CQ8IYS0 662 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 ZSCAN10Q96SZ4 725 aaPredicted RBP16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 PARP1P09874 1014 aaKnown RBP16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 PLCD1P51178 756 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 EEF2KMTQ96G04 330 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 IFIH1Q9BYX4 1025 aaKnown RBP16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 CXorf56Q9H5V9 222 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 L2HGDHQ9H9P8 463 aa16.21■□□□□ 0.19
RPRD1A-202ENST00000399022 GNA11P29992 359 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 AP1ARQ63HQ0 302 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 LRRC45Q96CN5 670 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 SLC24A3Q9HC58 644 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 TBC1D8O95759 1140 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 CFAP221Q4G0U5 840 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 KRT13P13646 458 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 PDCLQ13371 301 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 AEBP2Q6ZN18 517 aaPredicted RBP16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 CUL5Q93034 780 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 PPP1R12CQ9BZL4 782 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 DIP2AQ14689 1571 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 BICDL2A1A5D9 508 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 TXKP42681 527 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 VSNL1P62760 191 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 KRT79Q5XKE5 535 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 DPF2Q92785 391 aa16.2■□□□□ 0.18
RPRD1A-202ENST00000399022 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 A0A0G2JLW4 131 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 SLC8A1P32418 973 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 RABL6Q3YEC7 729 aaPredicted RBP16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 USPL1Q5W0Q7 1092 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 TYW1BQ6NUM6 668 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 TBC1D10CQ8IV04 446 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 SMYD4Q8IYR2 804 aaPredicted RBP16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 NOX5Q96PH1 765 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 KCNK9Q9NPC2 374 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 SH2B2O14492 632 aaPredicted RBP16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 MRPS25P82663 173 aaKnown RBP16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 ANKRD13CQ8N6S4 541 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 GPKOWQ92917 476 aaPredicted RBP eCLIP16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 KCNJ18B7U540 433 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 PPP1R12BO60237 982 aaPredicted RBP16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 KCNJ12Q14500 433 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 FBXW10Q5XX13 1052 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 CCDC25Q86WR0 208 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 TRIML1Q8N9V2 468 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
RPRD1A-202ENST00000399022 CHUKO15111 745 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 CCNT1O60563 726 aaKnown RBP16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 GOLGA8HP0CJ92 632 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 ARID4AP29374 1257 aaPredicted RBP16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 MYO1AQ9UBC5 1043 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 SWAP70Q9UH65 585 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 GGCXP38435 758 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 PDE4DQ08499 809 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 TRIM58Q8NG06 486 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 STRBPQ96SI9 672 aaKnown RBP16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 CEP83Q9Y592 693 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 PLCG2P16885 1265 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 ATP11AP98196 1134 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 GKAP1Q5VSY0 366 aaPredicted RBP16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 WDR66Q8TBY9 1149 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 USP32Q8NFA0 1604 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 ZNF609O15014 1411 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 GSPT2Q8IYD1 628 aaKnown RBP16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 MAN1B1Q9UKM7 699 aa16.18■□□□□ 0.18
RPRD1A-202ENST00000399022 A0A1W2PRG0 241 aa16.17■□□□□ 0.18
RPRD1A-202ENST00000399022 ACTN3Q08043 901 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms