RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 DDX19AQ9NUU7 478 aaKnown RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 SAMD15Q9P1V8 674 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 CLCA2Q9UQC9 943 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 USP16Q9Y5T5 823 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 TSTA3Q13630 321 aaPredicted RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 PDCD2Q16342 344 aaPredicted RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 CHST3Q7LGC8 479 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 MAATS1Q7Z4T9 603 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 SH3TC2Q8TF17 1288 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 SNX25Q9H3E2 840 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 SLAIN2Q9P270 581 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 BCAR3O75815 825 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 CIB2O75838 187 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 GCNT3O95395 438 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 TMEM191BP0C7N4 346 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 PSMA4P25789 261 aaKnown RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 SLC7A3Q8WY07 619 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 ARL8AQ96BM9 186 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 PGBD1Q96JS3 809 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 CCDC42Q96M95 316 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 AATKQ6ZMQ8 1374 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 IKBKBO14920 756 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 ATP2C2O75185 946 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 ZMYND10O75800 440 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 SCG2P13521 617 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 GARSP41250 739 aaKnown RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 CACNB1Q02641 598 aaPredicted RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 BTBD8Q5XKL5 378 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 KAZNQ674X7 775 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 IQUBQ8NA54 791 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 NT5C2P49902 561 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 HNRNPH2P55795 449 aaKnown RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 CERKLQ49MI3 558 aaPredicted RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 KRT27Q7Z3Y8 459 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 EIF2AQ9BY44 585 aaKnown RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 LARSQ9P2J5 1176 aaKnown RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 THRAP3Q9Y2W1 955 aaKnown RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 SPOPO43791 374 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 ATL3Q6DD88 541 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 P3H4Q92791 437 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 ECHDC1Q9NTX5 307 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 HOXC10Q9NYD6 342 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 TTF2Q9UNY4 1162 aaKnown RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 SOS2Q07890 1332 aaPredicted RBP5.49□□□□□ -1.53
TTC3-204ENST00000399017 MED7O43513 233 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 SUN1O94901 812 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 FLIIQ13045 1269 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 PSMD2Q13200 908 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 RPGRIP1Q96KN7 1286 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 TRIM54Q9BYV2 358 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 SH3TC1Q8TE82 1336 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 DNA2P51530 1060 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 CCDC62Q6P9F0 684 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 NECAB1Q8N987 351 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 KLHL3Q9UH77 587 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 MOSPD1Q9UJG1 213 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 TOPBP1Q92547 1522 aa5.49□□□□□ -1.53
TTC3-204ENST00000399017 FOSP01100 380 aaPredicted RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 YY1P25490 414 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 NCKAP1LP55160 1127 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 SH3BGRP55822 239 aaPredicted RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 CALCRLQ16602 461 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 PDXDC1Q6P996 788 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 C16orf62Q7Z3J2 963 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 ZNF467Q7Z7K2 595 aaPredicted RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 CCDC17Q96LX7 622 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 ALG1Q9BT22 464 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 LRRC4Q9HBW1 653 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 NKIRAS1Q9NYS0 192 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 IPPQ9Y573 584 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 FAM83GA6ND36 823 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 TUBB4AP04350 444 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 ARHGDIAP52565 204 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 SNX30Q5VWJ9 437 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 KCNV1Q6PIU1 500 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.48□□□□□ -1.53
TTC3-204ENST00000399017 DHX38Q92620 1227 aaKnown RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 RPF1Q9H9Y2 349 aaKnown RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 TOPORSQ9NS56 1045 aaPredicted RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 GCC2Q8IWJ2 1684 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 LRRC9Q6ZRR7 1453 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 CCDC183Q5T5S1 534 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 ARFGAP2Q8N6H7 521 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 GDAP1L1Q96MZ0 367 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 SEC62Q99442 399 aaKnown RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 CFBP00751 764 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 SRGAP2CP0DJJ0 459 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 KIF20BQ96Q89 1820 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 LRRC31Q6UY01 552 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 C7orf31Q8N865 590 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 SCUBE2Q9NQ36 999 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 DDX56Q9NY93 547 aaKnown RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 LUC7L2Q9Y383 392 aaKnown RBP5.48□□□□□ -1.53
TTC3-204ENST00000399017 VAV2P52735 878 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 TCP10Q12799 353 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 TTLL6Q8N841 843 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 IL1RAPL2Q9NP60 686 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 ST7Q9NRC1 585 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 PCDHA1Q9Y5I3 950 aa5.48□□□□□ -1.53
TTC3-204ENST00000399017 WDR62O43379 1518 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms