RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 ZBED4O75132 1171 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 PGK1P00558 417 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 TAL1P17542 331 aaPredicted RBP13.26□□□□□ -0.29
SRMP1-201ENST00000398959 PDE4BQ07343 736 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 IFNL3Q8IZI9 196 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 CPXCR1Q8N123 301 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 KIFC2Q96AC6 838 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 NACAP1Q9BZK3 213 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 PHF24Q9UPV7 400 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 STXBP5LQ9Y2K9 1186 aa13.26□□□□□ -0.29
SRMP1-201ENST00000398959 LCTP09848 1927 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 LRRC37A2A6NM11 1700 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 IGKV6D-41A0A0C4DH26 115 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 DLL1O00548 723 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 TTLL1O95922 423 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 SLC3A2P08195 630 aaKnown RBP13.25□□□□□ -0.29
SRMP1-201ENST00000398959 ZNF865P0CJ78 1059 aaPredicted RBP13.25□□□□□ -0.29
SRMP1-201ENST00000398959 TSPY3P0CV98 308 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 TSPY8P0CW00 308 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 LRRC47Q8N1G4 583 aaKnown RBP13.25□□□□□ -0.29
SRMP1-201ENST00000398959 MSL3Q8N5Y2 521 aaKnown RBP13.25□□□□□ -0.29
SRMP1-201ENST00000398959 BADQ92934 168 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 FSD1Q9BTV5 496 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 NAPBQ9H115 298 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 PDLIM7Q9NR12 457 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 MTMR4Q9NYA4 1195 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 ISY1Q9ULR0 285 aaKnown RBP13.25□□□□□ -0.29
SRMP1-201ENST00000398959 RIPK3Q9Y572 518 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 MYH6P13533 1939 aa13.25□□□□□ -0.29
SRMP1-201ENST00000398959 PLIN4Q96Q06 1357 aa13.24□□□□□ -0.29
SRMP1-201ENST00000398959 A0A1W2PQ45 241 aaPredicted RBP13.24□□□□□ -0.29
SRMP1-201ENST00000398959 A0A1W2PQY0 241 aa13.24□□□□□ -0.29
SRMP1-201ENST00000398959 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
SRMP1-201ENST00000398959 ANKRD35Q8N283 1001 aa13.24□□□□□ -0.29
SRMP1-201ENST00000398959 MKL1Q969V6 931 aa13.24□□□□□ -0.29
SRMP1-201ENST00000398959 LENG1Q96BZ8 264 aaPredicted RBP13.24□□□□□ -0.29
SRMP1-201ENST00000398959 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
SRMP1-201ENST00000398959 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
SRMP1-201ENST00000398959 ZHX1Q9UKY1 873 aaPredicted RBP13.24□□□□□ -0.29
SRMP1-201ENST00000398959 UNC80Q8N2C7 3258 aa13.24□□□□□ -0.29
SRMP1-201ENST00000398959 GBF1Q92538 1859 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 SYNRGQ9UMZ2 1314 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 TRIM43BA6NCK2 446 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 ATP2A1O14983 1001 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 CLTBP09497 229 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 TLE2Q04725 743 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 SHHQ15465 462 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 ZNF697Q5TEC3 545 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 SLFN13Q68D06 897 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 FAM109BQ6ICB4 259 aaPredicted RBP13.23□□□□□ -0.29
SRMP1-201ENST00000398959 GMCL1P1Q8NEA9 526 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 PI4K2BQ8TCG2 481 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 NUP133Q8WUM0 1156 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 TRIM43Q96BQ3 446 aaPredicted RBP13.23□□□□□ -0.29
SRMP1-201ENST00000398959 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
SRMP1-201ENST00000398959 FBXO40Q9UH90 709 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 FAM184BQ9ULE4 1060 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 SYNPO2Q9UMS6 1093 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 TACC3Q9Y6A5 838 aa13.23□□□□□ -0.29
SRMP1-201ENST00000398959 DNAJC25-GNG10A0A024R161 153 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 TMEM232C9JQI7 657 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
SRMP1-201ENST00000398959 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 SNAI1O95863 264 aaPredicted RBP13.22□□□□□ -0.29
SRMP1-201ENST00000398959 BMP3P12645 472 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 MX1P20591 662 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 STAT2P52630 851 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 OAZ1P54368 228 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 TFAP4Q01664 338 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 PPARAQ07869 468 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
SRMP1-201ENST00000398959 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 C9orf50Q5SZB4 431 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 MAMDC4Q6UXC1 1216 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 ZNF467Q7Z7K2 595 aaPredicted RBP13.22□□□□□ -0.29
SRMP1-201ENST00000398959 CHST13Q8NET6 341 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 OTUD7AQ8TE49 926 aaPredicted RBP13.22□□□□□ -0.29
SRMP1-201ENST00000398959 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
SRMP1-201ENST00000398959 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 PCDHB15Q9Y5E8 787 aa13.22□□□□□ -0.29
SRMP1-201ENST00000398959 A0A0C4DFX4 3053 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 EYSQ5T1H1 3165 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 FDX1P10109 184 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 RAG1P15918 1043 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 ACLYP53396 1101 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 GUCD1Q96NT3 240 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 SPC25Q9HBM1 224 aa13.21□□□□□ -0.29
SRMP1-201ENST00000398959 LAMA4Q16363 1823 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms