RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 GOLGA8FQ08AF8 430 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 GOLGA8DPQ0D2H9 430 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 TRAF1Q13077 416 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 CABP7Q86V35 215 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 NME8Q8N427 588 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 LMBR1Q8WVP7 490 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 ASXL1Q8IXJ9 1541 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 ARHGAP42A6NI28 874 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 CALUO43852 315 aaPredicted RBP10.3□□□□□ -0.76
ATL3-201ENST00000398868 EN1Q05925 392 aaPredicted RBP10.3□□□□□ -0.76
ATL3-201ENST00000398868 SLC12A1Q13621 1099 aa10.3□□□□□ -0.76
ATL3-201ENST00000398868 DIS3L2Q8IYB7 885 aaKnown RBP10.3□□□□□ -0.76
ATL3-201ENST00000398868 SMAD1Q15797 465 aaKnown RBP10.3□□□□□ -0.76
ATL3-201ENST00000398868 FAF1Q9UNN5 650 aaPredicted RBP10.3□□□□□ -0.76
ATL3-201ENST00000398868 A0A087WWV3 80 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 EIF4E1BA6NMX2 242 aaKnown RBP10.29□□□□□ -0.76
ATL3-201ENST00000398868 K7ENM7 598 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 LTKP29376 864 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 LIG4P49917 911 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 ITIH3Q06033 890 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 RASIP1Q5U651 963 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 TYW1BQ6NUM6 668 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 SUPT20HQ8NEM7 779 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 CCDC26Q8TAB7 109 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 ALKBH8Q96BT7 664 aaKnown RBP10.29□□□□□ -0.76
ATL3-201ENST00000398868 ANLNQ9NQW6 1124 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 SMYD2Q9NRG4 433 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 CTTNBP2NLQ9P2B4 639 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 PPARAQ07869 468 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 GCKRQ14397 625 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 ERCC6LQ2NKX8 1250 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 PCIF1Q9H4Z3 704 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 CBX8Q9HC52 389 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 TBC1D8O95759 1140 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 GABPB1Q06547 395 aaPredicted RBP10.29□□□□□ -0.76
ATL3-201ENST00000398868 PARP10Q53GL7 1025 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 RAPGEF6Q8TEU7 1601 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 MYL3P08590 195 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 C7orf31Q8N865 590 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 ZMAT2Q96NC0 199 aaKnown RBP10.29□□□□□ -0.76
ATL3-201ENST00000398868 TSGA10Q9BZW7 698 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 LOC102724428A0A0B4J2F2 783 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 SIK1P57059 783 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 MTX1Q13505 466 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 KRT81Q14533 505 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 PROSER3Q2NL68 480 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 PSTPIP2Q9H939 334 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 F5H423 210 aaPredicted RBP10.29□□□□□ -0.76
ATL3-201ENST00000398868 SNAP23O00161 211 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 SEC31AO94979 1220 aaKnown RBP10.29□□□□□ -0.76
ATL3-201ENST00000398868 IFNB1P01574 187 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 CCT5P48643 541 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 HHATQ5VTY9 493 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 CDC37L1Q7L3B6 337 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 GPBP1Q86WP2 473 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
ATL3-201ENST00000398868 SOS1Q07889 1333 aaPredicted RBP10.29□□□□□ -0.76
ATL3-201ENST00000398868 CAVIN2O95810 425 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 ATF7P17544 494 aaPredicted RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 RPL13P26373 211 aaKnown RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 ICA1Q05084 483 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 TMTC4Q5T4D3 741 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 KIAA1841Q6NSI8 718 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 PIK3R5Q8WYR1 880 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 ANGEL1Q9UNK9 670 aaKnown RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 ANKRD65E5RJM6 399 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 BUB1O43683 1085 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 TMOD1P28289 359 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 SLFNL1Q499Z3 407 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 NLRP7Q8WX94 980 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 RPS6KC1Q96S38 1066 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 ARHGAP25P42331 645 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 ADKP55263 362 aaKnown RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 CLUL1Q15846 466 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 CCDC14Q49A88 953 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 PI16Q6UXB8 463 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 ASIC3Q9UHC3 531 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 SERPINB2P05120 415 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 HOXA13P31271 388 aaPredicted RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 ZNF827Q17R98 1081 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 NSMCE1Q8WV22 266 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 TEX14Q8IWB6 1497 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 ZBBXA8MT70 800 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 DEXIO95424 95 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 SRGAP2CP0DJJ0 459 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 POLE2P56282 527 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 ABCB5Q2M3G0 1257 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 KCNH3Q9ULD8 1083 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 ZNF335Q9H4Z2 1342 aaPredicted RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 ATP10BO94823 1461 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 PRPHP41219 470 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 PHKA1P46020 1223 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 ADCY1Q08828 1119 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 NELFBQ8WX92 580 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 JPH2Q9BR39 696 aaPredicted RBP10.28□□□□□ -0.76
ATL3-201ENST00000398868 FIS1Q9Y3D6 152 aa10.28□□□□□ -0.76
ATL3-201ENST00000398868 SSTR3P32745 418 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms