RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 STAG2Q8N3U4 1231 aa20.27■□□□□ 0.84
CSNK1D-204ENST00000398519 CHURC1Q8WUH1 139 aa20.27■□□□□ 0.84
CSNK1D-204ENST00000398519 NUP133Q8WUM0 1156 aa20.27■□□□□ 0.84
CSNK1D-204ENST00000398519 MORF4L1Q9UBU8 362 aa20.27■□□□□ 0.84
CSNK1D-204ENST00000398519 MAD2L2Q9UI95 211 aa20.27■□□□□ 0.84
CSNK1D-204ENST00000398519 VWA5AO00534 786 aa20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 RXRAP19793 462 aa20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 CTCFP49711 727 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 APOBRQ0VD83 1088 aa20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 FAM110CQ1W6H9 321 aa20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 RAB11FIP4Q86YS3 637 aa20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 BTBD7Q9P203 1132 aa20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 COL11A1P12107 1806 aaPredicted RBP20.26■□□□□ 0.83
CSNK1D-204ENST00000398519 KLF18A0A0U1RQI7 1052 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 MICU3Q86XE3 530 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 ZNF296Q8WUU4 475 aaPredicted RBP20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 MAP3K14Q99558 947 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 CPVLQ9H3G5 476 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 PRR12Q9ULL5 1215 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 RABGAP1Q9Y3P9 1069 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 ERVK-9P63128 1117 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 ERVK-24P63145 666 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 SP3Q02447 781 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 SYDE2Q5VT97 1194 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 MB21D1Q8N884 522 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 REPS2Q8NFH8 660 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 UBA5Q9GZZ9 404 aa20.25■□□□□ 0.83
CSNK1D-204ENST00000398519 CALM1P0DP23 149 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 CALM2P0DP24 149 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 CALM3P0DP25 149 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 NEK4P51957 841 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 LBX1P52954 281 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 TMEM132BQ14DG7 1078 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 Q3C1V9 767 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 SYNE3Q6ZMZ3 975 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 GPRC5AQ8NFJ5 357 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 CTCFLQ8NI51 663 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 ALDH8A1Q9H2A2 487 aaPredicted RBP20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 SLC38A10Q9HBR0 1119 aa20.24■□□□□ 0.83
CSNK1D-204ENST00000398519 KLRF2D3W0D1 207 aa20.23■□□□□ 0.83
CSNK1D-204ENST00000398519 ZBTB43O43298 467 aa20.23■□□□□ 0.83
CSNK1D-204ENST00000398519 FKTNO75072 461 aa20.23■□□□□ 0.83
CSNK1D-204ENST00000398519 EVCP57679 992 aa20.23■□□□□ 0.83
CSNK1D-204ENST00000398519 ZNF214Q9UL59 606 aaPredicted RBP20.23■□□□□ 0.83
CSNK1D-204ENST00000398519 ZSWIM8A7E2V4 1837 aa20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 GOLGA8BA8MQT2 603 aa20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 SNAP25P60880 206 aa20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 LACTBP83111 547 aaPredicted RBP20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 CAP1Q01518 475 aa20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 SLC35G1Q2M3R5 365 aa20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 FANCBQ8NB91 859 aa20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 LARP6Q9BRS8 491 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 NAP1L2Q9ULW6 460 aaPredicted RBP20.22■□□□□ 0.83
CSNK1D-204ENST00000398519 ZBED4O75132 1171 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 KIF5BP33176 963 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 RCAN1P53805 252 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 AK2P54819 239 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 NBPF11Q86T75 865 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 ADGRF4Q8IZF3 695 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 SPATC1LQ9H0A9 340 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 HPS5Q9UPZ3 1129 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 NID2Q14112 1375 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 FDX1P10109 184 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 CTGFP29279 349 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 PLS1Q14651 629 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 CD99L2Q8TCZ2 262 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 ARHGAP39Q9C0H5 1083 aa20.21■□□□□ 0.83
CSNK1D-204ENST00000398519 ZNF536O15090 1300 aa20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 GOLGA8AA7E2F4 631 aa20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 ATP2A1O14983 1001 aa20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 CYTH3O43739 400 aa20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 ECM2O94769 699 aaPredicted RBP20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 PLEKHA8P1O95397 391 aa20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 PDIA3P30101 505 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 CPXCR1Q8N123 301 aa20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 MOV10L1Q9BXT6 1211 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 PORCNQ9H237 461 aa20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 JMJD4Q9H9V9 463 aa20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 RAVER2Q9HCJ3 691 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 CTDP1Q9Y5B0 961 aaPredicted RBP20.2■□□□□ 0.82
CSNK1D-204ENST00000398519 METAP2P50579 478 aaKnown RBP eCLIP20.19■□□□□ 0.823e-6■■□□□ 12.2
CSNK1D-204ENST00000398519 OAZ1P54368 228 aa20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 RABEP1Q15276 862 aa20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 ANKRD1Q15327 319 aa20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 RTN1Q16799 776 aa20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 CCDC174Q6PII3 467 aa20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 ERO1AQ96HE7 468 aa20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 TEX13BQ9BXU2 312 aa20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 FAM217BQ9NTX9 383 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 CASP8AP2Q9UKL3 1982 aa20.19■□□□□ 0.82
CSNK1D-204ENST00000398519 DHX16O60231 1041 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 CDC27P30260 824 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 STAT3P40763 770 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 GNAQP50148 359 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 CCNA1P78396 465 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 SNRNP48Q6IEG0 339 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms