RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SNX14Q9Y5W7 946 aa29.89■■■□□ 2.38
U2AF1-203ENST00000398137 CEP290O15078 2479 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 SLC15A5A6NIM6 579 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 WDR46O15213 610 aaKnown RBP29.88■■■□□ 2.37
U2AF1-203ENST00000398137 FLOT1O75955 427 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 TTLL1O95922 423 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 IGHA2P01877 340 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 MB21D2Q8IYB1 491 aaPredicted RBP29.88■■■□□ 2.37
U2AF1-203ENST00000398137 NPLOC4Q8TAT6 608 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 SPATC1LQ9H0A9 340 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 FBXO28Q9NVF7 368 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 CLIP2Q9UDT6 1046 aa29.88■■■□□ 2.37
U2AF1-203ENST00000398137 HOXC6P09630 235 aa29.87■■■□□ 2.37
U2AF1-203ENST00000398137 CAPN2P17655 700 aa29.87■■■□□ 2.37
U2AF1-203ENST00000398137 CCND3P30281 292 aaPredicted RBP29.87■■■□□ 2.37
U2AF1-203ENST00000398137 WDR78Q5VTH9 848 aa29.87■■■□□ 2.37
U2AF1-203ENST00000398137 TRMT44Q8IYL2 757 aaKnown RBP29.87■■■□□ 2.37
U2AF1-203ENST00000398137 DPF3Q92784 378 aa29.87■■■□□ 2.37
U2AF1-203ENST00000398137 PAWRQ96IZ0 340 aaKnown RBP29.87■■■□□ 2.37
U2AF1-203ENST00000398137 TCP11L1Q9NUJ3 509 aa29.87■■■□□ 2.37
U2AF1-203ENST00000398137 ADAMTS5Q9UNA0 930 aa29.87■■■□□ 2.37
U2AF1-203ENST00000398137 STX8Q9UNK0 236 aa29.87■■■□□ 2.37
U2AF1-203ENST00000398137 FRMPD3Q5JV73 1810 aa29.87■■■□□ 2.37
U2AF1-203ENST00000398137 MYH4Q9Y623 1939 aa29.86■■■□□ 2.37
U2AF1-203ENST00000398137 COL9A3Q14050 684 aaPredicted RBP29.86■■■□□ 2.37
U2AF1-203ENST00000398137 ADCK5Q3MIX3 580 aa29.86■■■□□ 2.37
U2AF1-203ENST00000398137 TSGA10IPQ3SY00 556 aa29.86■■■□□ 2.37
U2AF1-203ENST00000398137 HABP4Q5JVS0 413 aaKnown RBP29.86■■■□□ 2.37
U2AF1-203ENST00000398137 IQCA1Q86XH1 822 aa29.86■■■□□ 2.37
U2AF1-203ENST00000398137 LRRC47Q8N1G4 583 aaKnown RBP29.86■■■□□ 2.37
U2AF1-203ENST00000398137 UBAC1Q9BSL1 405 aa29.86■■■□□ 2.37
U2AF1-203ENST00000398137 OGDHLQ9ULD0 1010 aa29.86■■■□□ 2.37
U2AF1-203ENST00000398137 ERCC3P19447 782 aa29.85■■■□□ 2.37
U2AF1-203ENST00000398137 KRT32Q14532 448 aa29.85■■■□□ 2.37
U2AF1-203ENST00000398137 PPP4R3BQ5MIZ7 849 aa29.85■■■□□ 2.37
U2AF1-203ENST00000398137 ZSCAN10Q96SZ4 725 aaPredicted RBP29.85■■■□□ 2.37
U2AF1-203ENST00000398137 HTATIP2Q9BUP3 242 aa29.85■■■□□ 2.37
U2AF1-203ENST00000398137 COLQQ9Y215 455 aaPredicted RBP29.85■■■□□ 2.37
U2AF1-203ENST00000398137 RAD21O60216 631 aa29.84■■■□□ 2.37
U2AF1-203ENST00000398137 ANTXR2P58335 489 aa29.84■■■□□ 2.37
U2AF1-203ENST00000398137 TMEM132BQ14DG7 1078 aa29.84■■■□□ 2.37
U2AF1-203ENST00000398137 LHX8Q68G74 356 aa29.84■■■□□ 2.37
U2AF1-203ENST00000398137 CHST3Q7LGC8 479 aa29.84■■■□□ 2.37
U2AF1-203ENST00000398137 MB21D1Q8N884 522 aa29.84■■■□□ 2.37
U2AF1-203ENST00000398137 SHCBP1Q8NEM2 672 aa29.84■■■□□ 2.37
U2AF1-203ENST00000398137 CWC22Q9HCG8 908 aaKnown RBP29.84■■■□□ 2.37
U2AF1-203ENST00000398137 TNKSO95271 1327 aa29.84■■■□□ 2.37
U2AF1-203ENST00000398137 FAM83BQ5T0W9 1011 aa29.83■■■□□ 2.37
U2AF1-203ENST00000398137 ANKLE1Q8NAG6 615 aa29.83■■■□□ 2.37
U2AF1-203ENST00000398137 JAKMIP1Q96N16 626 aaKnown RBP29.83■■■□□ 2.37
U2AF1-203ENST00000398137 NEK1Q96PY6 1258 aa29.83■■■□□ 2.37
U2AF1-203ENST00000398137 ZNFX1Q9P2E3 1918 aaKnown RBP29.83■■■□□ 2.37
U2AF1-203ENST00000398137 NOVP48745 357 aa29.82■■■□□ 2.36
U2AF1-203ENST00000398137 RCSD1Q6JBY9 416 aa29.82■■■□□ 2.36
U2AF1-203ENST00000398137 ENAHQ8N8S7 591 aaPredicted RBP29.82■■■□□ 2.36
U2AF1-203ENST00000398137 REPS2Q8NFH8 660 aa29.82■■■□□ 2.36
U2AF1-203ENST00000398137 NUP88Q99567 741 aaPredicted RBP29.82■■■□□ 2.36
U2AF1-203ENST00000398137 GOPCQ9HD26 462 aa29.82■■■□□ 2.36
U2AF1-203ENST00000398137 IVNS1ABPQ9Y6Y0 642 aa29.82■■■□□ 2.36
U2AF1-203ENST00000398137 PRC1O43663 620 aa29.81■■■□□ 2.36
U2AF1-203ENST00000398137 COBLO75128 1261 aa29.81■■■□□ 2.36
U2AF1-203ENST00000398137 ADORA2AP29274 412 aa29.81■■■□□ 2.36
U2AF1-203ENST00000398137 CCDC178Q5BJE1 867 aa29.81■■■□□ 2.36
U2AF1-203ENST00000398137 MKL1Q969V6 931 aa29.81■■■□□ 2.36
U2AF1-203ENST00000398137 TOP1P11387 765 aaKnown RBP29.8■■■□□ 2.36
U2AF1-203ENST00000398137 MCM5P33992 734 aa29.8■■■□□ 2.36
U2AF1-203ENST00000398137 SAMD1Q6SPF0 538 aaPredicted RBP29.8■■■□□ 2.36
U2AF1-203ENST00000398137 NECAB2Q7Z6G3 386 aa29.8■■■□□ 2.36
U2AF1-203ENST00000398137 TRPV1Q8NER1 839 aa29.8■■■□□ 2.36
U2AF1-203ENST00000398137 TMEM47Q9BQJ4 181 aa29.8■■■□□ 2.36
U2AF1-203ENST00000398137 PPP1R9AQ9ULJ8 1098 aa29.8■■■□□ 2.36
U2AF1-203ENST00000398137 F5H6K3 240 aa29.79■■■□□ 2.36
U2AF1-203ENST00000398137 IFIT3O14879 490 aaKnown RBP29.79■■■□□ 2.36
U2AF1-203ENST00000398137 NDUFB10O96000 172 aa29.79■■■□□ 2.36
U2AF1-203ENST00000398137 KLRC3Q07444 240 aa29.79■■■□□ 2.36
U2AF1-203ENST00000398137 PLS1Q14651 629 aa29.79■■■□□ 2.36
U2AF1-203ENST00000398137 TTC14Q96N46 770 aa29.79■■■□□ 2.36
U2AF1-203ENST00000398137 SYNPO2Q9UMS6 1093 aa29.79■■■□□ 2.36
U2AF1-203ENST00000398137 MTMR7Q9Y216 660 aa29.79■■■□□ 2.36
U2AF1-203ENST00000398137 RANBP2P49792 3224 aaKnown RBP29.79■■■□□ 2.36
U2AF1-203ENST00000398137 VWA5AO00534 786 aa29.78■■■□□ 2.36
U2AF1-203ENST00000398137 STRNO43815 780 aa29.78■■■□□ 2.36
U2AF1-203ENST00000398137 CYP2C19P33261 490 aa29.78■■■□□ 2.36
U2AF1-203ENST00000398137 SART3Q15020 963 aaKnown RBP29.78■■■□□ 2.36
U2AF1-203ENST00000398137 SEC23AQ15436 765 aa29.78■■■□□ 2.36
U2AF1-203ENST00000398137 DGKHQ86XP1 1220 aa29.78■■■□□ 2.36
U2AF1-203ENST00000398137 GMCL1P1Q8NEA9 526 aa29.78■■■□□ 2.36
U2AF1-203ENST00000398137 TCEANC2Q96MN5 208 aa29.78■■■□□ 2.36
U2AF1-203ENST00000398137 ZNF214Q9UL59 606 aaPredicted RBP29.78■■■□□ 2.36
U2AF1-203ENST00000398137 ERICH2A1L162 156 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 CPA1P15085 419 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 TMEM67Q5HYA8 995 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 IFIT1BQ5T764 474 aaKnown RBP29.77■■■□□ 2.36
U2AF1-203ENST00000398137 RASGRP2Q7LDG7 609 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 NCAPG2Q86XI2 1143 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 CHMP4CQ96CF2 233 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 LRRC2Q9BYS8 371 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 PRO3102Q9H379 93 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 MROH8Q9H579 483 aa29.77■■■□□ 2.36
U2AF1-203ENST00000398137 GPHNQ9NQX3 736 aaPredicted RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms