RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 NLRP6P59044 892 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 CWC27Q6UX04 472 aaKnown RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 OSBPL5Q9H0X9 879 aaPredicted RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 DNAJC25Q9H1X3 360 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 RIC8AQ9NPQ8 531 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 PDRG1Q9NUG6 133 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 A6NJY4 79 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 AP1G2O75843 785 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 IFIT2P09913 472 aaKnown RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 PSMA5P28066 241 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 BPIFB3P59826 476 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 C10orf67Q8IYJ2 551 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 SLC7A5P1Q8MH63 180 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 GIMAP8Q8ND71 665 aaPredicted RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 ZNF75CPQ92670 426 aaPredicted RBP7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 PPP2R3BQ9Y5P8 575 aa7.39□□□□□ -1.23
TM9SF4-202ENST00000398022 VPS37CA5D8V6 355 aaPredicted RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 BAIAP3O94812 1187 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 EIF2S2P20042 333 aaKnown RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 KRT85P78386 507 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 MPP3Q13368 585 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 CLPPQ16740 277 aaPredicted RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 INO80DQ53TQ3 878 aaPredicted RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 LARP1Q6PKG0 1096 aaKnown RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 ZNF710Q8N1W2 664 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 TNMDQ9H2S6 317 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 LUC7L2Q9Y383 392 aaKnown RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 DNAJC6O75061 913 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 PYGLP06737 847 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 NFX1Q12986 1120 aaKnown RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 TMEM95Q3KNT9 176 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 VPS53Q5VIR6 699 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 JAKMIP1Q96N16 626 aaKnown RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 PSD3Q9NYI0 1048 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 KIAA1468Q9P260 1216 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 FBXL5Q9UKA1 691 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 RPSAP08865 295 aaKnown RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 EIF4BP23588 611 aaKnown RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 USP11P51784 963 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 E2F4Q16254 413 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 ZNF746Q6NUN9 644 aaPredicted RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 GIMAP7Q8NHV1 300 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 FAM167BQ9BTA0 163 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 IRX2Q9BZI1 471 aaPredicted RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 LGR6Q9HBX8 967 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 FBXO2Q9UK22 296 aaPredicted RBP7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 SSX2IPQ9Y2D8 614 aa7.38□□□□□ -1.23
TM9SF4-202ENST00000398022 PLSCR1O15162 318 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 STAM2O75886 525 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 MYL3P08590 195 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 HOXB7P09629 217 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 GJB2P29033 226 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 ANKRD1Q15327 319 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 CCDC83Q8IWF9 413 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 TM6SF1Q9BZW5 370 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 LSG1Q9H089 658 aaKnown RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 MMADHCQ9H3L0 296 aaPredicted RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 TRPC6Q9Y210 931 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 NRXN2Q9P2S2 1712 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 ARFGEF1Q9Y6D6 1849 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 IQCA1LA6NCM1 817 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 C2orf81A6NN90 581 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 R3HDM1Q15032 1099 aaKnown RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 FKBP15Q5T1M5 1219 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 MMS22LQ6ZRQ5 1243 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 KIAA0825Q8IV33 1275 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 IPCEF1Q8WWN9 437 aaPredicted RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 JAKMIP2Q96AA8 810 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 PCMTD1Q96MG8 357 aaPredicted RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 OSBPL10Q9BXB5 764 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 ECHDC1Q9NTX5 307 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 C9orf78Q9NZ63 289 aaPredicted RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 MRPS23Q9Y3D9 190 aaKnown RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 RPAP1Q9BWH6 1393 aaPredicted RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 hCG_1984214I3L0E3 225 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 HSD17B7P56937 341 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 TEFQ10587 303 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 FAM133BQ5BKY9 247 aaKnown RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 PI4K2BQ8TCG2 481 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 BICD2Q8TD16 824 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 LTV1Q96GA3 475 aaPredicted RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 NAP1L3Q99457 506 aaPredicted RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 PHACTR1Q9C0D0 580 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 TTC12Q9H892 705 aaPredicted RBP7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 KRT82Q9NSB4 513 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 SPG7Q9UQ90 795 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 TJP1Q07157 1748 aa7.37□□□□□ -1.23
TM9SF4-202ENST00000398022 BTF3P20290 206 aaKnown RBP7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 YY1P25490 414 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 COPAP53621 1224 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 MAP3K11Q16584 847 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 KIAA1614Q5VZ46 1190 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 MTHFD1LQ6UB35 978 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 RUFY3Q7L099 469 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 NUP62CLQ9H1M0 184 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 SH3GLB2Q9NR46 395 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 DKK3Q9UBP4 350 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 SNX5Q9Y5X3 404 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 KDM1AO60341 852 aa7.36□□□□□ -1.23
TM9SF4-202ENST00000398022 ADCY9O60503 1353 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms