RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 MYH4Q9Y623 1939 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 TPM2P07951 284 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 GDPD2Q9HCC8 539 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 PICK1Q9NRD5 415 aa22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 POLR2AP24928 1970 aaKnown RBP22.24■■□□□ 1.15
PDLIM2-204ENST00000397760 PPP1R12BO60237 982 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 POTEIP0CG38 1075 aa22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 POTEJP0CG39 1038 aa22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 SPICE1Q8N0Z3 855 aa22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.23■■□□□ 1.159e-7■□□□□ 8.4
PDLIM2-204ENST00000397760 RRP36Q96EU6 259 aaKnown RBP22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 NUP88Q99567 741 aaPredicted RBP22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 VCPKMTQ9H867 229 aa22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 VPS54Q9P1Q0 977 aa22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 KCNJ14Q9UNX9 436 aa22.23■■□□□ 1.15
PDLIM2-204ENST00000397760 BMP3P12645 472 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 NF2P35240 595 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 SLC16A2P36021 539 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 ZYXQ15942 572 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 FEZ1Q99689 392 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 PTPRAP18433 802 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 KIAA1755Q5JYT7 1200 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 FAM173BQ6P4H8 233 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 HOMER1Q86YM7 354 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 PIGSQ96S52 555 aa22.22■■□□□ 1.15
PDLIM2-204ENST00000397760 ELP1O95163 1332 aa22.21■■□□□ 1.15
PDLIM2-204ENST00000397760 MMP1P03956 469 aa22.21■■□□□ 1.15
PDLIM2-204ENST00000397760 KIF23Q02241 960 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-204ENST00000397760 NOL9Q5SY16 702 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-204ENST00000397760 ADGRF4Q8IZF3 695 aa22.21■■□□□ 1.15
PDLIM2-204ENST00000397760 SHISA4Q96DD7 197 aa22.21■■□□□ 1.15
PDLIM2-204ENST00000397760 SEC63Q9UGP8 760 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-204ENST00000397760 MAP3K9P80192 1104 aa22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 SAFBQ15424 915 aaKnown RBP eCLIP22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 JMJD4Q9H9V9 463 aa22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 AS3MTQ9HBK9 375 aa22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 TMEM232C9JQI7 657 aa22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 DNM1Q05193 864 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 GNL2Q13823 731 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 MAP1SQ66K74 1059 aaPredicted RBP22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 GPKOWQ92917 476 aaPredicted RBP eCLIP22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 WDR18Q9BV38 432 aa22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 PHF20Q9BVI0 1012 aa22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 KIAA1683Q9H0B3 1180 aa22.2■■□□□ 1.14
PDLIM2-204ENST00000397760 KIF28PB7ZC32 967 aa22.19■■□□□ 1.14
PDLIM2-204ENST00000397760 IREB2P48200 963 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-204ENST00000397760 IKQ13123 557 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-204ENST00000397760 FAM83BQ5T0W9 1011 aa22.19■■□□□ 1.14
PDLIM2-204ENST00000397760 HEATR3Q7Z4Q2 680 aa22.19■■□□□ 1.14
PDLIM2-204ENST00000397760 SH3GLB2Q9NR46 395 aa22.19■■□□□ 1.14
PDLIM2-204ENST00000397760 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-204ENST00000397760 USP17L10C9JJH3 530 aa22.18■■□□□ 1.14
PDLIM2-204ENST00000397760 SPP2Q13103 211 aa22.18■■□□□ 1.14
PDLIM2-204ENST00000397760 WWC2Q6AWC2 1192 aa22.18■■□□□ 1.14
PDLIM2-204ENST00000397760 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-204ENST00000397760 DIS3L2Q8IYB7 885 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-204ENST00000397760 ZHX2Q9Y6X8 837 aa22.18■■□□□ 1.14
PDLIM2-204ENST00000397760 NLRP5P59047 1200 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 KRT85P78386 507 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 BRAPQ7Z569 592 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 RNF214Q8ND24 703 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 ZNF280CQ8ND82 737 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 ZNF526Q8TF50 670 aaPredicted RBP22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 NMRK2Q9NPI5 230 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 BARHL2Q9NY43 387 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 BAZ2BQ9UIF8 2168 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 PNMA6FA0A0J9YX94 578 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 BTBD18B2RXH4 712 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 STXBP3O00186 592 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 FIBPO43427 364 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 U2AF2P26368 475 aaKnown RBP eCLIP22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 MTMR2Q13614 643 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 VGLL4Q14135 290 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 TTLL12Q14166 644 aaPredicted RBP22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 BTNL9Q6UXG8 535 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 MTMR8Q96EF0 704 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 CSADQ9Y600 493 aa22.17■■□□□ 1.14
PDLIM2-204ENST00000397760 ATAD5Q96QE3 1844 aa22.16■■□□□ 1.14
PDLIM2-204ENST00000397760 SYDE2Q5VT97 1194 aa22.16■■□□□ 1.14
PDLIM2-204ENST00000397760 LDHDQ86WU2 507 aa22.16■■□□□ 1.14
PDLIM2-204ENST00000397760 LPAR1Q92633 364 aa22.16■■□□□ 1.14
PDLIM2-204ENST00000397760 FOXP1Q9H334 677 aaPredicted RBP22.16■■□□□ 1.14
PDLIM2-204ENST00000397760 SNCAIPQ9Y6H5 919 aa22.16■■□□□ 1.14
PDLIM2-204ENST00000397760 ZBTB5O15062 677 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 STAT2P52630 851 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 USP14P54578 494 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 BACE1P56817 501 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 TYW1BQ6NUM6 668 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 MOB2Q70IA6 237 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 OXER1Q8TDS5 423 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 FUCA2Q9BTY2 467 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 SCAND2PQ9GZW5 306 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 BRMS1Q9HCU9 246 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 TFIP11Q9UBB9 837 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 DOCK1Q14185 1865 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 TRIM75PA6NK02 468 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 KRT2P35908 639 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 MAP3K11Q16584 847 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 CCDC148Q8NFR7 591 aa22.15■■□□□ 1.14
PDLIM2-204ENST00000397760 CHURC1Q8WUH1 139 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms