RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HAND2P61296 217 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ZNF622Q969S3 477 aaKnown RBP eCLIP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 FAM89AQ96GI7 184 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 PHF20Q9BVI0 1012 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ZNF652Q9Y2D9 606 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 TNKSO95271 1327 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 MPHOSPH10O00566 681 aaKnown RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 KRT86O43790 486 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 CYLC1P35663 651 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 MTIF2P46199 727 aaKnown RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC6Q16204 474 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 FAM71BQ8TC56 605 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 DENND2AQ9ULE3 1009 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 MBD4O95243 580 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 CYP19A1P11511 503 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 PEX19P40855 299 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 PLA2G4AP47712 749 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ZBED6P86452 979 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 RASGRF1Q13972 1273 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 MEA1Q16626 185 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 CFAP58Q5T655 872 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 TTC19Q6DKK2 380 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 CYP26C1Q6V0L0 522 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 FMNL3Q8IVF7 1028 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 TNFRSF25Q93038 417 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 SLC26A6Q9BXS9 759 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ZNF446Q9NWS9 450 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 LUC7L2Q9Y383 392 aaKnown RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 SMIM23A6NLE4 172 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 BEND6Q5SZJ8 279 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 CNNM4Q6P4Q7 775 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 BRINP3Q76B58 766 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 PIH1D3Q9NQM4 214 aaKnown RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ST7Q9NRC1 585 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ATP8B3O60423 1300 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ACTN2P35609 894 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 AP1ARQ63HQ0 302 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ERGIC2Q96RQ1 377 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 NSRP1Q9H0G5 558 aaKnown RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 TSKSQ9UJT2 592 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 MAN1B1Q9UKM7 699 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 MACROD2A1Z1Q3 448 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 GOLGA6BA6NDN3 693 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 B4E1Z4 1266 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 CDC27P30260 824 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ARHGAP25P42331 645 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 GLT8D2Q9H1C3 349 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 COL18A1P39060 1754 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 SYNRGQ9UMZ2 1314 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 PVALEFA0A1B0GWK0 134 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 BICDL2A1A5D9 508 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 FGFR1OPO95684 399 aaKnown RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 LDHCP07864 332 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 CCDC172P0C7W6 258 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ADORA1P30542 326 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 PHKA1P46020 1223 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 AMPD2Q01433 879 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 SF3A3Q12874 501 aaKnown RBP eCLIP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 SMYD5Q6GMV2 418 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 RNF10Q8N5U6 811 aaKnown RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 ANKS4BQ8N8V4 417 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 DNAJC7Q99615 494 aa6.08□□□□□ -1.44
PTPRD-205ENST00000397611 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-205ENST00000397611 TCP1P17987 556 aaKnown RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 TOB1P50616 345 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 PAPD7Q5XG87 772 aaKnown RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 KIFC2Q96AC6 838 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 EPB41L4AQ9HCS5 686 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 ARPP21Q9UBL0 812 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 LGALS16A8MUM7 142 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 AKR1B10O60218 316 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 MCTP2Q6DN12 878 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 SPATS2Q86XZ4 545 aaKnown RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 ADSSL1Q8N142 457 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 FBF1Q8TES7 1133 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 MED15Q96RN5 788 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 RIOK1Q9BRS2 568 aaKnown RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 FAM204AQ9H8W3 233 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 PLAGL2Q9UPG8 496 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 FAN1Q9Y2M0 1017 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 CCNE1P24864 410 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 CCT5P48643 541 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 DPYDQ12882 1025 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 PRPF4BQ13523 1007 aaKnown RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 TTC38Q5R3I4 469 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 CEP85LQ5SZL2 805 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 SPTY2D1Q68D10 685 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 EMBQ6PCB8 327 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 PNMA8AQ86V59 439 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 DESI2Q9BSY9 194 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 THAP9Q9H5L6 903 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 KBTBD4Q9NVX7 518 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 SERTAD1Q9UHV2 236 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 ADAM21Q9UKJ8 722 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 EIF3CLB5ME19 914 aaKnown RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 RHOBTB3O94955 611 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 TRIM21P19474 475 aaKnown RBP6.07□□□□□ -1.44
PTPRD-205ENST00000397611 KRT9P35527 623 aa6.07□□□□□ -1.44
PTPRD-205ENST00000397611 GLE1Q53GS7 698 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms